Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1429309	1429362	54	2 [1]	[1] 2	stfR	Rac prophage; putative membrane protein

ATGCCCGTCCGGAGGCACTGCGCCGTTTTGAACTGATGGTGGAAGAGGTGGCGCGTAACGCGTCCGCGGTGGCACAGAACACGGCAGCCGCGAAGAAGTCAGCCAGTGATGCCAGCACATCAGCCCGTGAGGCGGCAACCCATGCGGCTGATGC  >  NC_000913/1429338‑1429491                          |                                                                                                                                 atgCCCGCCCGGGGGGCCTGCGCCGGTTTGAA‑TGGTTGGGGAAAAGGTGGCGGGTAACGCGTCCGGGGGGGCACAGAACACGGCAGCCGCGAAGAAGTCAGCCAGTGATGCCAGCACATCAGCCCGTGa                          <  1:379224/129‑1 (MQ=255)                          ttttTAACCGGTGGGGGAAGGGGGGGCGCGTAACGCGTCCGGGGTGGCAAAGAACACGGCAGCCGCGAAGAAGTCAGCCAGTGATGCCAGCACATCAGCCCGTGAGGCGGCAACCCATGCGGCTGAtgc  <  1:513807/129‑1 (MQ=255)                          |                                                                                                                                 ATGCCCGTCCGGAGGCACTGCGCCGTTTTGAACTGATGGTGGAAGAGGTGGCGCGTAACGCGTCCGCGGTGGCACAGAACACGGCAGCCGCGAAGAAGTCAGCCAGTGATGCCAGCACATCAGCCCGTGAGGCGGCAACCCATGCGGCTGATGC  >  NC_000913/1429338‑1429491

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑