Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,978,503 Δ776 bp insB‑5–insA‑5 insB‑5, insA‑5

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1978503 1979278 776 6 [1] [0] 5 insB‑5–insA‑5 insB‑5,insA‑5

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 19785021 (0.130)5 (0.700) 5/240 0.3 91.4% intergenic (‑305/+16) flhD/insB‑5 DNA‑binding transcriptional dual regulator FlhD/IS1 protein InsB
?NC_000913 1979279 = 0 (0.000)intergenic (‑64/‑474) insA‑5/uspC IS1 protein InsA/universal stress protein C

CACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAA  >  NC_000913/1979165‑1979350
                                                                                                                  |                                                                       
ctaaatcgacgcaactgtactcgtcactacacgcccatacaacggatgggggctgcgattttcaataatgcgggatgcagatcacacaaaaaactcaattacttaacataaatgTTTAAGTCAACCttt                                                           >  1:189058‑M2/115‑129 (MQ=255)
                                 cacatacaacggaggggggctgcgattttcaataatgcgtgatgcagatcacccaaaacacccaattacttaacataaatgTATAATTCATAATTTTGTTTTGGGTGTATTCAAATCTtttaaaagat                           >  1:502284‑M2/82‑125 (MQ=255)
                                               gggggttgccattttaaataaggcgtgattcagagtacacaaaacacgcaaatacctaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTag            <  1:581589‑M2/62‑1 (MQ=255)
                                                       cgattttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAgcaagcaa     >  1:604256‑M2/60‑128 (MQ=255)
                                                         attttcaataatgcgtgatgcagatcacacaaaacactcaattacttaacataaatgTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACCCTTGCAACaaaaaa  >  1:491873‑M2/58‑129 (MQ=255)
                                                                                                                  |                                                                       
CACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATAAATGTATAAGTCATACTTTTGTTTTGGGTGTATTTCAATCTGTTAAAAAGTTTTTCGCTACGCTAGCAAGCAAAAA  >  NC_000913/1979165‑1979350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑