Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	2074410	2074449	40	2 [1]	[0] 2	flu	CP4‑44 prophage; self recognizing antigen 43 (Ag43) autotransporter

GAGATATGCGTGTGGGGACTTCCACTGCAGGCAGCGGGATGACGTTCTCTCCCTCACAGAATGGCACATCACTGGACCTGCAGGCCGGA‑CTGGAA‑GCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCA  >  NC_000913/2074450‑2074579 |                                                                                                                                    gagaTATGCGTGTGGGGACTTCCACTGCAGGCAGCGGGATGACGTTCTCTCCCTCACGGAATGGCCCATCACTGAACCT‑CAGGCCGGACCTGGAA‑‑CCCCTTTCCGGGAAAAACCCCCCCGGGGCGTCCa  >  1:120120/1‑129 (MQ=255) gagaTATGCGTGTGGGGACTTCCACTGCAGGCAGCGGGATGACGTTCTCTCCCTCACAGAATGGCACATCACTGGACCTGCGGGCCGG‑‑CTGGAAGGCCGGTGCCGGGGAAAATTTAACCCTggggttta   >  1:248100/1‑124 (MQ=255) |                                                                                                                                    GAGATATGCGTGTGGGGACTTCCACTGCAGGCAGCGGGATGACGTTCTCTCCCTCACAGAATGGCACATCACTGGACCTGCAGGCCGGA‑CTGGAA‑GCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCA  >  NC_000913/2074450‑2074579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑