| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 122 [0] | [0] 123 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 122 (1.380) | 71/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
Only 100 of 122 total aligned reads displayed.
TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > NC_000913/173448‑173495 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT > 1:5115935/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:2449275/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT < 1:359226/49‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:1034829/50‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:4905223/50‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA < 1:4674459/49‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:317772/1‑49 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:4275652/1‑49 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA < 1:1775653/49‑1 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:6661095/50‑1 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:3446658/1‑50 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:4236721/1‑50 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:1270371/50‑1 TCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:651261/1‑49 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT > 1:1017175/1‑49 TCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA > 1:6454299/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG < 1:3196711/50‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG < 1:3558378/50‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 1:6075556/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 1:6102807/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:2292943/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:2008450/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:2656053/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:4658800/47‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:5268343/50‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:792300/50‑1 TTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC > 1:3801552/1‑50 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC > 1:3658536/1‑50 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC > 1:5042213/1‑50 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC < 1:5565157/49‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:301289/50‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT > 1:1152627/1‑50 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:897435/50‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:492312/50‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:3459047/50‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:6201952/50‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC < 1:2839901/49‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC < 1:455628/49‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC < 1:2355383/49‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC < 1:1180457/49‑1 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:5436523/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:1454410/1‑50 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:5361287/1‑49 TATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA > 1:3255432/1‑50 TATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA > 1:2304201/1‑50 TATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA > 1:4566452/1‑50 ATCGTTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:4835813/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG < 1:1625158/50‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG < 1:4600271/50‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG > 1:1287647/1‑50 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:4115496/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:4677877/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:1944529/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:6234683/49‑1 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC < 1:2496638/50‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:5108896/50‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT > 1:2793982/1‑50 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:2488312/50‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:4627132/50‑1 CACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG > 1:4037808/1‑49 CACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG > 1:4466255/1‑49 CACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG < 1:6527617/49‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC < 1:5174678/50‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC > 1:489636/1‑50 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC > 1:5560810/1‑50 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC > 1:977354/1‑50 TTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:4271041/1‑49 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:3836513/1‑50 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA < 1:3452205/49‑1 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT > 1:4894219/1‑49 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT > 1:4206869/1‑49 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT > 1:1805502/1‑49 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT < 1:2922193/49‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:254423/1‑49 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 1:5249946/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 1:531263/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:4001132/1‑48 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC > 1:5068356/1‑50 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG < 1:3526702/49‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG < 1:189905/49‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG < 1:1632562/49‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG < 1:1636270/49‑1 GAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCG < 1:1596523/50‑1 AGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGT < 1:1804205/50‑1 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT < 1:5303413/50‑1 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT < 1:3446583/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:2663568/1‑49 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA < 1:2603339/50‑1 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC < 1:5392484/49‑1 TACCATTCCATATAACGGCCATGTACGCCTGGACGGATAAAGCGTTTACG < 1:6466503/50‑1 ACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:125522/1‑50 ACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:1032390/1‑50 ACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:4153727/1‑50 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG < 1:2823326/50‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG < 1:3888815/50‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:2130084/1‑49 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC < 1:3175311/49‑1 CATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA < 1:2868922/50‑1 CATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA < 1:1226523/50‑1 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:946725/1‑49 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > NC_000913/173448‑173495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |