| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 332,366 | Δ44,951 bp | pdeL–yaiL | 39 genes pdeL, yahB, yahC, yahD, yahE, yahF, yahG, yahH, yahI, yahJ, yahK, yahL, yahM, yahN, yahO, prpR, prpB, prpC, prpD, prpE, codB, codA, cynR, cynT, cynS, cynX, lacA, lacY, lacZ, lacI, mhpR, mhpA, mhpB, mhpC, mhpD, mhpF, mhpE, mhpT, yaiL |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 332366 | 377316 | 44951 | 98 [0] | [0] 99 | pdeL–yaiL | pdeL,yahB,yahC,yahD,yahE,yahF,yahG,yahH,yahI,yahJ,yahK,yahL,yahM,yahN,yahO,prpR,prpB,prpC,prpD,prpE,codB,codA,cynR,cynT,cynS,cynX,lacA,lacY,lacZ,lacI,mhpR,mhpA,mhpB,mhpC,mhpD,mhpF,mhpE,mhpT,yaiL |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 332365 | 0 (0.000) | 97 (1.100) | 62/98 | 0.0 | 100% | intergenic (+489/‑6) | yahV/pdeL | protein YahV/DNA‑binding transcriptional activator/c‑di‑GMP phosphodiesterase PdeL |
| ? | NC_000913 | 377317 = | NA (NA) | intergenic (+6/+218) | yaiL/frmB | DUF2058 domain‑containing protein YaiL/S‑formylglutathione hydrolase FrmB | |||||
GAATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/332317‑332365‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCA > NC_000913/377317‑377364 GAATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGG < 1:2659860/50‑1GAATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGG < 1:872155/50‑1GAATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGG < 1:5686850/50‑1GAATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGG < 1:5370429/50‑1GAATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGG < 1:1776979/50‑1 AATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGA > 1:2021858/1‑50 TCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGAT > 1:4651733/1‑49 CGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGAT > 1:3801823/1‑48 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAG < 1:5416925/50‑1 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAG < 1:5346295/50‑1 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAA < 1:5726026/49‑1 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAA < 1:1554901/49‑1 ACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGT < 1:1034301/50‑1 ACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGT > 1:1978375/1‑50 ACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGT < 1:4767575/50‑1 ACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGT < 1:146475/50‑1 ACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGT < 1:6666164/50‑1 ACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGT < 1:944801/50‑1 GGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGT > 1:5603119/1‑50 GGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGT < 1:1916121/50‑1 GTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTG < 1:5067964/50‑1 GTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTG < 1:6017464/50‑1 GTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTG < 1:3701777/50‑1 TAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGC < 1:2434969/50‑1 TAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGC < 1:3586604/50‑1 ATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCG > 1:4550095/1‑49 CACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCG > 1:3683825/1‑47 ACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGA < 1:5123346/50‑1 ACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCG > 1:1099107/1‑46 CTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGAT < 1:1157317/50‑1 CTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGAT < 1:6287135/50‑1 CTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGAT < 1:1551765/50‑1 CTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGAT > 1:1757727/1‑50 CTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGAT > 1:3310946/1‑50 CTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGAT < 1:3366145/50‑1 CTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGAT < 1:4623405/50‑1 CATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGC > 1:2587776/1‑50 ATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATG < 1:119098/48‑1 TACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCT < 1:4916209/50‑1 TACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCT < 1:215814/50‑1 ACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCT > 1:3463645/1‑49 CTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGA < 1:5590973/50‑1 CTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGA < 1:3603034/50‑1 CTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTG < 1:1382154/49‑1 TGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT > 1:6496631/1‑50 GAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATG > 1:5372144/1‑50 GAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATG > 1:6108249/1‑50 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGC < 1:2581789/50‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGC < 1:1624423/50‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGC < 1:1905001/50‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGC < 1:3538544/50‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATG < 1:4428571/49‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATG < 1:6429964/49‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATG < 1:6507255/49‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATG < 1:6575354/49‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT < 1:4045285/48‑1 ACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCG < 1:5068495/50‑1 ACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGC > 1:5492056/1‑49 CAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGA < 1:3000789/50‑1 CAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGA > 1:5322849/1‑50 AGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGAC < 1:6571026/50‑1 AGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGAC > 1:5762250/1‑50 GCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACG > 1:172662/1‑50 GCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACG > 1:5487187/1‑50 GCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACG < 1:1549576/50‑1 ATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTA > 1:6316034/1‑50 ATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTA > 1:4971574/1‑50 ATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTA < 1:2571054/50‑1 TAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTAT < 1:2393642/50‑1 TAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTAT < 1:1815056/50‑1 TAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTAT > 1:2837954/1‑50 AAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATG > 1:3449470/1‑50 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGC < 1:5928485/50‑1 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGC < 1:5389531/50‑1 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGC > 1:1615898/1‑50 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATG < 1:4178528/49‑1 AAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCG > 1:5809405/1‑50 AAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCG < 1:2306197/50‑1 AGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGC < 1:6098819/50‑1 GATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCG < 1:372699/50‑1 GATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCG < 1:4500096/50‑1 GATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCG > 1:2270597/1‑50 ATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGT < 1:4843736/50‑1 ATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGT < 1:5576830/50‑1 TAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTC < 1:2459587/50‑1 TAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTC > 1:5405/1‑50 AAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCT > 1:1471197/1‑50 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTT < 1:463399/50‑1 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTT < 1:3485598/50‑1 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCT < 1:641676/49‑1 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCT > 1:6503158/1‑49 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCT > 1:3577802/1‑49 GGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAT > 1:5240745/1‑50 GTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATC < 1:1449859/50‑1 GTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAT > 1:128529/1‑49 TGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCA < 1:5573853/50‑1 TGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAT > 1:5886464/1‑48 GAATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/332317‑332365‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCA > NC_000913/377317‑377364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |