| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 121 [0] | [0] 122 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 121 (1.370) | 75/98 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
Only 100 of 121 total aligned reads displayed.
GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675503‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA > NC_000913/683371‑683417 GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCA > 1:3544010/1‑50GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCA < 1:753898/50‑1 TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT < 1:5680525/50‑1 CTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG > 1:3755585/1‑50 CTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG > 1:2154446/1‑50 TGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG > 1:3013806/1‑50 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC < 1:663782/49‑1 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:1460715/1‑49 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC < 1:4251798/49‑1 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG < 1:2029218/48‑1 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG < 1:1009703/47‑1 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG < 1:2797062/47‑1 TTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGA < 1:2306958/50‑1 TTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:1123420/1‑48 TTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAG > 1:3381318/1‑50 TTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAG > 1:2691205/1‑50 TCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAG < 1:1183872/49‑1 TCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAG < 1:4782482/49‑1 CGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTT > 1:3766501/1‑50 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC > 1:5237015/1‑50 CACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT > 1:1912213/1‑50 CACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT > 1:3884520/1‑50 CACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT < 1:5215130/50‑1 CACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT > 1:4897097/1‑50 CAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGC < 1:5691359/50‑1 AGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCA < 1:4903945/50‑1 GCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT > 1:4971189/1‑50 GCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT < 1:220326/50‑1 CAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATT < 1:3425137/50‑1 CAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT > 1:6416237/1‑49 CAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT > 1:5249915/1‑49 AATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTA > 1:361684/1‑50 ATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTAT < 1:6146582/50‑1 ATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTAT < 1:4130424/50‑1 ATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTAT < 1:5329004/50‑1 TAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATC < 1:6486665/50‑1 AAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATC > 1:5716749/1‑49 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCA < 1:5701478/50‑1 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCA < 1:3379363/50‑1 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCC < 1:801114/49‑1 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCC < 1:1661794/49‑1 AGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCAT > 1:6638030/1‑50 AGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCAT > 1:5422168/1‑50 AGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCAT < 1:5838449/50‑1 AGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCAT > 1:1703862/1‑50 GAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATT > 1:5185738/1‑50 GAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATT > 1:3782873/1‑50 AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG > 1:2656215/1‑50 AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG < 1:4453677/50‑1 AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG < 1:421154/50‑1 GAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG > 1:6476619/1‑49 AATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCA > 1:220571/1‑50 AATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCA > 1:3524596/1‑50 AATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCA < 1:3478768/50‑1 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT < 1:137426/50‑1 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT < 1:717293/50‑1 ATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT > 1:5320245/1‑49 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA > 1:4476869/1‑50 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA < 1:2069859/50‑1 GGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA > 1:266969/1‑49 GGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA > 1:2555194/1‑49 GGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA > 1:781688/1‑49 GGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTAT < 1:5898599/49‑1 GGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTAT < 1:1256233/49‑1 GGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTAT < 1:1553229/49‑1 GCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATAT < 1:4852409/50‑1 GCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATAT > 1:2225739/1‑50 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATC > 1:3772072/1‑50 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATC > 1:2767644/1‑50 CGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCT < 1:3580780/50‑1 CGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCT > 1:5001158/1‑50 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT > 1:1541954/1‑50 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT > 1:6037738/1‑50 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT > 1:5984228/1‑50 AATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG < 1:4716556/50‑1 AATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG < 1:1704278/50‑1 AATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG < 1:5316756/50‑1 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA < 1:4700764/50‑1 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG > 1:3059535/1‑49 TGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA > 1:5842634/1‑49 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAG < 1:40227/50‑1 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAA < 1:1507718/49‑1 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGA < 1:4140938/50‑1 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGA < 1:596708/50‑1 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGA < 1:3373344/50‑1 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAG > 1:173182/1‑49 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAG > 1:4500675/1‑49 ATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAA < 1:3187537/50‑1 ATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGA > 1:4618231/1‑49 TTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA < 1:1201226/50‑1 TTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA < 1:5588563/50‑1 TCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA > 1:3966645/1‑49 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAA < 1:2195207/49‑1 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA > 1:6328005/1‑48 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA > 1:2819621/1‑48 CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA < 1:2098616/49‑1 CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA < 1:677845/49‑1 CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA < 1:5212656/49‑1 CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA > 1:6316584/1‑47 CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA > 1:4027116/1‑47 GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675503‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA > NC_000913/683371‑683417 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |