| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 123 [0] | [0] 120 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 114 (1.340) | 69/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
Only 100 of 123 total aligned reads displayed.
AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729315‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA > NC_000913/738963‑739011 AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA < 1:6311515/50‑1AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA > 1:2650062/1‑50AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA < 1:5880156/50‑1AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA < 1:1542080/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 1:4351642/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC > 1:138895/1‑50 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 1:2261028/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 1:5827823/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 1:2004469/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGCTTTGAATACATTGAAC < 1:3817574/50‑1 AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACG > 1:2999851/1‑50 AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACG < 1:6494800/50‑1 AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACG < 1:891168/50‑1 GGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC > 1:2833241/1‑50 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCT < 1:1977488/50‑1 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCT < 1:5113023/50‑1 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC > 1:4045750/1‑49 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA < 1:2815434/50‑1 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTAC < 1:1555971/50‑1 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:3042163/1‑49 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:1932602/1‑49 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:2211682/1‑49 ACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACA < 1:2253527/50‑1 CTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACAC > 1:2814792/1‑50 CTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACAC < 1:4645781/50‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTT < 1:4632384/49‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTT < 1:573465/49‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTT < 1:1498879/49‑1 TGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTAC < 1:2231431/50‑1 TGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTAC > 1:4909012/1‑50 TGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTAC > 1:1421707/1‑50 GATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT > 1:2424062/1‑50 GATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT > 1:1025834/1‑50 GATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT > 1:4862726/1‑50 GATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT > 1:4942042/1‑50 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTC < 1:2347621/50‑1 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTC > 1:1756978/1‑50 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTC > 1:3554858/1‑50 TTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCC > 1:3626834/1‑50 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:4026867/1‑50 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCT < 1:1307660/49‑1 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG < 1:6039044/49‑1 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:4034084/1‑49 TATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGT < 1:3687447/49‑1 ATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTA > 1:4713660/1‑49 ATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTA < 1:475002/49‑1 ATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTA > 1:4230521/1‑49 ATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTA < 1:1439374/49‑1 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA < 1:4164071/50‑1 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA > 1:797426/1‑50 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA > 1:4385811/1‑50 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA > 1:1211596/1‑50 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAA < 1:1553010/49‑1 TGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAAC > 1:209110/1‑50 GATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC > 1:2837016/1‑50 GATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAAC < 1:3452411/49‑1 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCG > 1:1652252/1‑50 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC < 1:2876849/49‑1 GCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:842941/1‑49 CTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTC < 1:983785/49‑1 CTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:4662096/1‑48 TGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 1:2488328/1‑50 TGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 1:5155304/1‑50 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGA < 1:6163283/50‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGA < 1:3998223/50‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG < 1:6165663/48‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG < 1:2378412/48‑1 GTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG < 1:4281821/50‑1 GTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:6228057/1‑50 GTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:5889521/1‑50 TTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:4676016/1‑49 TTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:2561586/1‑49 TTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCA < 1:5193792/49‑1 TGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:696859/1‑49 TGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:6259646/1‑49 GAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGT > 1:5331418/1‑49 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA < 1:6585068/50‑1 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA > 1:6308977/1‑50 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTA < 1:835710/49‑1 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTA < 1:241005/49‑1 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTA < 1:6182310/49‑1 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT < 1:4326672/50‑1 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT < 1:4972964/50‑1 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT < 1:3939420/50‑1 ACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG > 1:661337/1‑49 ACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG > 1:2720768/1‑49 ACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG > 1:3054928/1‑49 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAA > 1:5968856/1‑50 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAA < 1:3066603/50‑1 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAA > 1:5297020/1‑50 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGA < 1:51056/49‑1 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT < 1:5487808/50‑1 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT < 1:4728621/50‑1 TTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC < 1:5718974/50‑1 TTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC < 1:3485705/50‑1 TTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC < 1:1108205/50‑1 GAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCT < 1:4165007/49‑1 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAC < 1:261237/50‑1 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAC < 1:4550216/50‑1 ACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA < 1:1294939/50‑1 AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729315‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA > NC_000913/738963‑739011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |