| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 765,208 | Δ5,405 bp | [mngR]–mngB | [mngR], mngA, mngB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 765208 | 770612 | 5405 | 95 [0] | [0] 90 | [mngR]–mngB | [mngR],mngA,mngB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 765207 | 0 (0.000) | 85 (0.980) | 47/96 | 0.1 | 100% | coding (669/723 nt) | mngR | DNA‑binding transcriptional repressor MngR |
| ? | NC_000913 | 770613 = | 0 (0.000) | intergenic (+2/‑845) | mngB/cydA | alpha‑mannosidase/cytochrome bd‑I ubiquinol oxidase subunit I | |||||
CGCGATGATTTTCGCTGCGCTATCAGGGTAAATTTATAGTCATCGGTATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/765157‑765207‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACAAAGG > NC_000913/770613‑770661 CGCGATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTA > 1:6281867/1‑50 GCGATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTA < 1:406596/49‑1 GCGATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTA > 1:3244604/1‑49 GCGATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTA > 1:5439622/1‑49 GCGATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTA > 1:3682858/1‑49 GCGATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTA < 1:6408918/49‑1 CGATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTA > 1:2862813/1‑48 GATGATTTTCGCTGCGCTATCAGGGTACA‑TTATAGTCATCGGTATTATAG > 1:4731087/1‑50 GATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAG < 1:473933/50‑1 GATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAG > 1:4705428/1‑50 GATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAG > 1:3113578/1‑50 GATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAG > 1:4623622/1‑50 GATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAG > 1:291201/1‑50 GATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAG < 1:2344743/50‑1 GATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAG > 1:5266466/1‑50 GATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAG > 1:4793564/1‑50 GATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAG > 1:6073672/1‑50 GATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAG > 1:8470/1‑50 GATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAG > 1:6404332/1‑50 ATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGC < 1:6034710/50‑1 ATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAG > 1:2181828/1‑49 ATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAG > 1:5860585/1‑49 ATGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAG > 1:5680114/1‑49 TGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCA < 1:3823492/50‑1 TGATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCA < 1:6081422/50‑1 ATTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAAT > 1:2525199/1‑50 TTTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATC < 1:4188734/50‑1 TTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATC > 1:649862/1‑49 TTTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATC > 1:185297/1‑49 TTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCA > 1:1386927/1‑49 TTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCA > 1:1508816/1‑49 TTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCA < 1:3052243/49‑1 TTCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCA > 1:3790011/1‑49 TCGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAA > 1:6170231/1‑50 CGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAAC > 1:726653/1‑50 CGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAA < 1:6413530/49‑1 CGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAA < 1:1726051/49‑1 CGCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAA < 1:589878/49‑1 GCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACC > 1:1443838/1‑50 GCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACC < 1:3778584/50‑1 GCTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACC > 1:3914333/1‑50 CTGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCG < 1:6200750/50‑1 CTGCGCTATCAAGGTAAA‑TTACAGTCATCGGTATTATAGCAATCAAACCG < 1:4699686/50‑1 TGCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCG > 1:4774659/1‑49 GCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCG > 1:610337/1‑48 GCGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCG > 1:3340618/1‑48 CGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAG < 1:3816119/50‑1 CGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAG > 1:5321858/1‑50 CGCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGA < 1:5096170/48‑1 GCTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGC > 1:5371210/1‑50 CTATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGC > 1:3624153/1‑49 TATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCA > 1:2159568/1‑50 ATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCA > 1:941302/1‑49 ATCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCA > 1:3457370/1‑49 TCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACA > 1:6318277/1‑50 TCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACA < 1:6340854/50‑1 TCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCA < 1:560328/48‑1 TCAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCA < 1:3287325/48‑1 CAGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACA > 1:400682/1‑49 AGGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATA > 1:4067491/1‑50 GGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATAT < 1:1803701/50‑1 GGGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATAT < 1:1668435/50‑1 GGTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATG < 1:5571976/50‑1 GTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGC < 1:116474/50‑1 GTAAA‑TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGC > 1:6002358/1‑50 aaTTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCG < 1:606074/48‑1 aaTTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGC < 1:3507938/47‑1 aaTTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGC < 1:5099657/47‑1 aTTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGG > 1:1243615/2‑50 aTTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGG < 1:1727623/49‑1 aTTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGG < 1:1013977/49‑1 aTTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGG > 1:4725738/2‑50 TTATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGC > 1:68106/1‑50 ATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCC < 1:671994/49‑1 ATAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCC < 1:860367/49‑1 ATAGTCATCGGTATTATAGCAATCAAACCGAAGACACATATGCGCGGC > 1:4098323/1‑48 TAGTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGC > 1:844231/1‑47 GTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGAT < 1:4011513/50‑1 GTCATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGAT > 1:4746402/1‑50 CATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTG > 1:4430676/1‑50 ATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGT > 1:5770901/1‑50 ATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGT > 1:4600640/1‑50 ATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGT > 1:2200979/1‑50 ATCGGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGT > 1:1021856/1‑50 GGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGA > 1:5250252/1‑50 GGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGA > 1:755299/1‑50 GGTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGA > 1:1699652/1‑50 GTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGAC < 1:3169908/50‑1 GTATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGAC < 1:2214636/50‑1 TATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGAC > 1:3308021/1‑49 ATTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACA > 1:1309139/1‑49 TTATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACAA < 1:5858951/49‑1 ATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACAAAGG > 1:2731577/1‑50 ATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACAAAG < 1:4272732/49‑1 ATAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGAAAAAGG > 1:1325851/1‑50 CGCGATGATTTTCGCTGCGCTATCAGGGTAAATTTATAGTCATCGGTATTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/765157‑765207‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aTAGCAATCAAACCGAAGCCACATATGCGCGGCCAGATTGTTGACAAAGG > NC_000913/770613‑770661 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |