| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,872,030 | Δ1,437 bp | [dgcJ] | [dgcJ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1872030 | 1873466 | 1437 | 90 [0] | [0] 90 | [dgcJ] | [dgcJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1872029 | 0 (0.000) | 89 (1.030) | 60/96 | 0.0 | 100% | intergenic (+169/‑12) | cdgI/dgcJ | putative c‑di‑GMP binding protein CdgI/putative diguanylate cyclase DgcJ |
| ? | NC_000913 | 1873467 = | 0 (0.000) | coding (1427/1491 nt) | dgcJ | putative diguanylate cyclase DgcJ | |||||
GGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1871981‑1872029‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACA > NC_000913/1873467‑1873514 GGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGA < 1:5331132/50‑1 GCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGAT < 1:3061599/50‑1 CCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATG < 1:1340422/50‑1 CCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATG < 1:4404496/50‑1 CCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATG > 1:1783322/1‑50 CGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGC > 1:4762526/1‑50 CGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGC > 1:3319589/1‑50 CGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGC > 1:1525597/1‑50 GCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCG < 1:4101237/50‑1 GCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCG > 1:2693652/1‑50 CAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCG > 1:972531/1‑49 CAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCG > 1:4949700/1‑49 CAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCG > 1:801635/1‑49 AATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTA < 1:1614157/50‑1 AATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTA > 1:4703148/1‑50 AATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTA > 1:2045668/1‑50 TCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATA < 1:3721296/50‑1 GAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAA < 1:2717374/50‑1 GAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAA < 1:5631196/49‑1 GAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAA < 1:3005432/49‑1 GAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATA > 1:2024310/1‑48 AACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAG < 1:2193206/50‑1 ACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGC > 1:3368464/1‑50 CTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCT > 1:2253892/1‑50 TTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTT > 1:392073/1‑50 TATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCC > 1:5511501/1‑50 TATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTT < 1:409947/48‑1 ATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCC > 1:1049995/1‑49 ATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCC < 1:4427012/49‑1 ATCTGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCC < 1:2239354/49‑1 TGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGAT > 1:1209990/1‑49 TGGTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGAT > 1:531135/1‑49 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATG < 1:5683223/48‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATG < 1:4559464/48‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGAT < 1:55507/47‑1 GTTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGAT < 1:84985/47‑1 TTTTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGC < 1:2274465/50‑1 TTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGT > 1:4935782/1‑50 TTCTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCG < 1:3698590/49‑1 CTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTT < 1:2160093/49‑1 CTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTT < 1:4365835/49‑1 CTCGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTT > 1:37944/1‑49 CGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTA > 1:138186/1‑49 CGTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTA > 1:6399786/1‑49 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATA < 1:824370/50‑1 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATA > 1:5984198/1‑50 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTAT < 1:3226072/49‑1 GTTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTAT < 1:6185839/49‑1 GTTTCACTAACCGAAGGAGAGGCGTATAAAGCTTCCGATGAGCGTTTAT < 1:6246972/49‑1 TTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATAT < 1:4576638/50‑1 TTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATAT < 1:6214044/50‑1 TTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATAT > 1:5493384/1‑50 TTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATAT < 1:5261228/50‑1 TTTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATAT > 1:6403561/1‑50 TTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATG > 1:3952496/1‑50 TTCACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATG > 1:5316371/1‑50 CACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGT < 1:5633635/49‑1 CACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGT > 1:5196455/1‑49 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCA < 1:477280/50‑1 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCA < 1:2550203/50‑1 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTC < 1:358984/49‑1 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTC > 1:5502689/1‑49 ACTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTC < 1:3401567/49‑1 CTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAA < 1:546893/50‑1 CTAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAA > 1:5999333/1‑50 TAACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAA > 1:5207753/1‑49 AACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAAT > 1:1790917/1‑49 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAA < 1:506314/50‑1 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAA < 1:1861224/50‑1 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAA < 1:5200762/50‑1 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATA < 1:5319644/49‑1 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAAT > 1:814245/1‑48 ACCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAAT < 1:5769892/48‑1 aCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG > 1:5695365/2‑50 CCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG < 1:757741/50‑1 CCGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG > 1:5426378/1‑50 CGAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG > 1:6060362/1‑49 GAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG > 1:3271177/1‑48 GAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG > 1:6459311/1‑48 GAAGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAG > 1:5136450/1‑48 AGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGA < 1:1513663/50‑1 AGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAG > 1:6636693/1‑49 AGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAG > 1:4744041/1‑49 AGGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAG > 1:5081622/1‑49 GGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAA < 1:6235257/50‑1 GGAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAA > 1:4808988/1‑50 GAGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAA > 1:6528620/1‑49 AGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAAC > 1:980709/1‑49 AGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAAC > 1:4394971/1‑49 GATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACA > 1:4274473/1‑49 GGCCGCAATCGAACTTTATCTGGTTTTCTCGTTTCACTAACCGAAGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1871981‑1872029‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACA > NC_000913/1873467‑1873514 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |