| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,509,631 | Δ8,319 bp | [yfeO]–pdeA | [yfeO], ypeC, mntH, nupC, insL‑3, pdeA | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2509631 | 2517949 | 8319 | 68 [0] | [0] 65 | [yfeO]–pdeA | [yfeO],ypeC,mntH,nupC,insL‑3,pdeA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2509630 | 0 (0.000) | 65 (0.730) | 43/98 | 0.2 | 100% | coding (1/1257 nt) | yfeO | putative transport protein YfeO |
| ? | NC_000913 | 2517950 = | 0 (0.000) | intergenic (‑118/+91) | pdeA/alaX | putative c‑di‑GMP phosphodiesterase PdeA/tRNA‑Ala | |||||
TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2509583‑2509630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > NC_000913/2517950‑2517998 TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAC < 1:4895461/49‑1 GCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAG > 1:5088739/1‑50 GCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACA < 1:2855765/49‑1 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGG < 1:4271388/50‑1 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGG < 1:1364610/50‑1 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGG > 1:2946280/1‑50 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAG < 1:4173601/49‑1 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAG < 1:2449349/49‑1 AAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGC > 1:4033397/1‑50 AAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGC > 1:4926162/1‑50 AGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCG < 1:3859616/50‑1 GCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGG > 1:1093191/1‑50 CTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGC < 1:5545758/50‑1 CTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGC < 1:448028/50‑1 CTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGC < 1:5069320/50‑1 GGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACT < 1:4290663/50‑1 GGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACT < 1:1439056/50‑1 GGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCAC < 1:3036628/49‑1 GGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCAC < 1:1269290/49‑1 CAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAA > 1:1373718/1‑50 CAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAA > 1:1035682/1‑50 AAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAAC < 1:6109423/50‑1 AAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAAC > 1:5957890/1‑50 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCC < 1:1300397/50‑1 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCC > 1:4438075/1‑50 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCC < 1:2243772/50‑1 CTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCG < 1:4709911/50‑1 TAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCG > 1:129935/1‑49 AAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGA > 1:1408578/1‑50 GTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 1:5556128/1‑50 GTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG < 1:5445337/50‑1 GTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG < 1:899933/50‑1 GTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG < 1:42054/50‑1 GTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG < 1:1678003/50‑1 TATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGT < 1:1337791/50‑1 TATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGT < 1:4413806/50‑1 TATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 1:765678/1‑49 TATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 1:4425764/1‑49 ATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 1:1935685/1‑48 ATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 1:2876407/1‑48 CTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGA > 1:2787350/1‑50 CTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGA > 1:5243065/1‑50 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTG > 1:4240818/1‑50 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACT < 1:5026779/49‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAG < 1:4003406/46‑1 CCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTA < 1:3010230/50‑1 CCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTAT > 1:4616063/1‑50 GCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA < 1:6289047/50‑1 GCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA < 1:5293662/50‑1 CATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTAC < 1:1123602/50‑1 CATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTAC < 1:4975128/50‑1 CATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTAC < 1:3724291/50‑1 CATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTACACTGTATTA > 1:6522555/1‑49 ATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTAC > 1:6155164/1‑49 TAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAA < 1:3118670/50‑1 TAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAA < 1:4106169/50‑1 AAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAA > 1:3208055/1‑49 AGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAA < 1:5229739/49‑1 AGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAA < 1:6105402/49‑1 AGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAA < 1:6105978/49‑1 GGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAG < 1:6170741/50‑1 GAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGC < 1:1457150/50‑1 AACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAA < 1:5189672/50‑1 AACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAA > 1:2623351/1‑49 ACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG < 1:4387101/50‑1 TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2509583‑2509630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > NC_000913/2517950‑2517998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |