| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2558699 | 2565488 | 6790 | 103 [0] | [0] 102 | intZ–[eutA] | intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2558698 | 0 (0.000) | 84 (1.140) | 48/82 | 0.0 | 100% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/CPZ‑55 prophage; putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 0 (0.000) | coding (1396/1404 nt) | eutA | reactivating factor for ethanolamine ammonia‑lyase EutBC | |||||
Only 100 of 118 total aligned reads displayed.
TGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2558642‑2558698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAA > NC_000913/2565489‑2565536 TGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:2714598/1‑50TGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:4224664/1‑50TGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:5903766/1‑50 GATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT > 1:1106304/1‑49 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT < 1:2579069/48‑1 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCT < 1:5752021/48‑1 TATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAG < 1:47310/50‑1 TATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAG < 1:4083972/50‑1 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGG < 1:2439626/49‑1 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGG > 1:3753611/1‑49 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGG < 1:492207/49‑1 ACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGG > 1:5421159/1‑48 CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:6501426/1‑50 CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:2509114/1‑50 CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG < 1:2143238/50‑1 CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAA < 1:340836/49‑1 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGG < 1:1302104/50‑1 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGG < 1:5986851/50‑1 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:5797129/1‑49 TTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGA < 1:3529774/50‑1 TTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGA < 1:745715/50‑1 TTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGG > 1:4528850/1‑49 TTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGG > 1:2813090/1‑49 TTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGG > 1:1284392/1‑49 TGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGA > 1:4591830/1‑49 TGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGA > 1:1239001/1‑49 TGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGA > 1:1548097/1‑49 GCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAA > 1:71921/1‑50 GCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAA < 1:814230/49‑1 GCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAA < 1:6101649/49‑1 CCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAAT < 1:2071134/50‑1 CCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAAT > 1:4973323/1‑50 CCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAAT > 1:4393037/1‑50 CCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAAT > 1:1831115/1‑50 CCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAAT > 1:829062/1‑50 CGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATG < 1:2477257/50‑1 AACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCG < 1:5546145/50‑1 AACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGC > 1:5434587/1‑49 ACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGA < 1:1339402/50‑1 ACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGC > 1:1820415/1‑48 AATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGT > 1:6372636/1‑50 AATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGT > 1:1370925/1‑50 ATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTG < 1:2280537/50‑1 ATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTG < 1:3014038/50‑1 ATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTG < 1:5750250/50‑1 ATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGT > 1:5502922/1‑49 TGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGA > 1:6091507/1‑50 GTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGAT > 1:1771649/1‑50 TGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATT > 1:673977/1‑50 GTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTT < 1:342608/49‑1 TCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCA < 1:1416167/50‑1 TCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCA > 1:5083074/1‑50 TCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCA < 1:6318412/50‑1 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGT > 1:3150305/1‑50 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCG < 1:5139100/49‑1 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCG < 1:2001407/49‑1 GTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCA < 1:5591970/50‑1 GTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCA < 1:1102443/50‑1 GTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTC < 1:3913320/49‑1 TTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCAC > 1:4378543/1‑50 TTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCAC > 1:5665966/1‑50 TTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCAC > 1:1095792/1‑50 TCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCG > 1:1072372/1‑50 TCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCG > 1:1387243/1‑50 CATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCG < 1:5843586/49‑1 ATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGC < 1:5237613/50‑1 ATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGG > 1:4543523/1‑49 ATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGG < 1:5299539/49‑1 ATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGG > 1:2106139/1‑49 TAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCA < 1:3105739/50‑1 GTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAA < 1:4637041/50‑1 CGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC > 1:44666/1‑50 CGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC > 1:3407760/1‑50 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCG < 1:6549216/50‑1 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC < 1:3851714/49‑1 TTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGA < 1:6019584/50‑1 TTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGA > 1:6076685/1‑50 TCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGAT > 1:3798623/1‑50 CCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCC > 1:58152/1‑50 CCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCC > 1:1782166/1‑50 CCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCC > 1:5910739/1‑50 CCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCC > 1:5940061/1‑50 CCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATC < 1:3101984/49‑1 CCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATC < 1:3700854/49‑1 CCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATC < 1:5911028/49‑1 CCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATC < 1:6273646/49‑1 TCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGC > 1:3377310/1‑50 CAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGC > 1:4969294/1‑49 AGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCA < 1:5148454/50‑1 AGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCA < 1:5036177/50‑1 AGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCC > 1:214069/1‑49 GGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAA < 1:4991126/50‑1 GAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA < 1:95881/50‑1 GAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA < 1:4088/50‑1 AAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAA < 1:3785364/50‑1 AAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAA < 1:1845212/50‑1 AAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAA < 1:842166/50‑1 AGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAA < 1:3522898/50‑1 AGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAA < 1:4489266/50‑1 AGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:885719/1‑48 TGATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2558642‑2558698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAA > NC_000913/2565489‑2565536 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |