| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,184,782 | Δ6,916 bp | ubiK–yqiI | ubiK, ygiL, yqiG, insC‑5, insD‑5, yqiG, yqiH, yqiI | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3184782 | 3191697 | 6916 | 123 [0] | [0] 124 | ubiK–yqiI | ubiK,ygiL,yqiG,insC‑5,insD‑5,yqiG,yqiH,yqiI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3184781 | 0 (0.000) | 119 (1.370) | 70/96 | 0.0 | 100% | intergenic (‑315/‑59) | ribB/ubiK | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/ubiquinone biosynthesis accessory factor UbiK |
| ? | NC_000913 | 3191698 = | 0 (0.000) | intergenic (+2/+41) | yqiI/glgS | putative fimbrial protein YqiI/surface composition regulator | |||||
Only 100 of 123 total aligned reads displayed.
CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3184732‑3184781‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT > NC_000913/3191698‑3191746 CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT < 1:3856941/50‑1 GCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATA > 1:958099/1‑50 GCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATA > 1:5152768/1‑50 CTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATAT < 1:867153/50‑1 CTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATAT < 1:3257319/50‑1 CTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATAT > 1:2515032/1‑50 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTA < 1:656588/50‑1 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCT < 1:1133688/49‑1 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCT > 1:1967363/1‑49 ATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATC < 1:2244496/48‑1 TGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAA < 1:4595189/50‑1 TGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAA > 1:3891381/1‑50 GATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAA > 1:1889013/1‑49 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATA > 1:6526448/1‑50 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATA > 1:6259652/1‑50 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATA > 1:3073756/1‑50 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATA > 1:2706566/1‑50 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATA > 1:337040/1‑50 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATA < 1:5202845/50‑1 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAAT < 1:6385649/49‑1 ATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAAT < 1:4427492/49‑1 TTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATAC < 1:6563571/50‑1 AGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACA < 1:3533084/49‑1 AGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACA > 1:2367141/1‑49 GCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAA < 1:737153/50‑1 GCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAA > 1:5953960/1‑50 GCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAA < 1:2900108/50‑1 CGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAAC < 1:6486040/50‑1 CGGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAA > 1:2960470/1‑49 GGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACA < 1:1226417/50‑1 GGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACA > 1:5455326/1‑50 GGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACA < 1:3233289/50‑1 GGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACA > 1:4679859/1‑50 GGCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACA > 1:628692/1‑50 GCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATGCAAACAC > 1:6441864/1‑50 GCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACAC < 1:440840/50‑1 GCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACAC < 1:2775632/50‑1 GCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACAC > 1:4636472/1‑50 GCAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACAC < 1:502180/50‑1 CAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACT < 1:2839946/50‑1 CAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACT < 1:2321684/50‑1 CAGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACAC > 1:2616475/1‑49 AGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTA < 1:1801791/50‑1 AGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTA < 1:1403169/50‑1 AGCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTA < 1:4894070/50‑1 GCAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTA > 1:3405905/1‑49 CAACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAA < 1:4980472/50‑1 AACGCATAGCTTCACATAATTCTGGTTTGTATCTAATACAAACACTAAAA > 1:6238641/1‑50 AACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAA < 1:1305502/50‑1 AACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAA > 1:1885431/1‑50 AACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAA > 1:666653/1‑50 AACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAA > 1:2906646/1‑50 ACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAAC < 1:695900/50‑1 ACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAAC < 1:5883890/50‑1 ACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAAC > 1:1749823/1‑50 ACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAAC < 1:1413473/50‑1 ACGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAAC < 1:2609662/50‑1 CGCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACG < 1:3182583/50‑1 GCATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGG < 1:5856229/50‑1 ATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGC < 1:4981341/50‑1 ATAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGC > 1:3648234/1‑50 TAGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGC > 1:2442503/1‑49 AGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCA > 1:4088059/1‑50 AGCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCA > 1:5830497/1‑50 GCTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT > 1:5381320/1‑50 CTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT > 1:2086884/1‑49 CTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT > 1:6205642/1‑49 CTTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT > 1:2466814/1‑49 TTCACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCAT > 1:2965979/1‑48 CACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGG > 1:5489280/1‑50 CACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGG > 1:686655/1‑50 CACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGG > 1:1235255/1‑50 CACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCA < 1:3625617/48‑1 ACATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGG < 1:3871142/49‑1 ATAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCC < 1:2942440/50‑1 TAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCG > 1:2067126/1‑50 TAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCG < 1:725959/50‑1 TAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCG > 1:3351441/1‑50 TAATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCG > 1:692843/1‑50 AATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGT > 1:5774642/1‑50 ATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGT > 1:6119143/1‑49 ATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGT > 1:4984499/1‑49 ATTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGT < 1:4647002/49‑1 TTCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTA > 1:6254440/1‑50 TCTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTA > 1:3951789/1‑49 CTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATA > 1:5578751/1‑50 CTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATA > 1:4247040/1‑50 CTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATA > 1:4474196/1‑50 CTGGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTAT < 1:6660810/49‑1 GGTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATAT > 1:2532347/1‑49 GTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATC < 1:1372223/49‑1 GTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATC < 1:171779/49‑1 GTTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATAT > 1:3234491/1‑48 TTTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAG < 1:419764/50‑1 TTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGT > 1:5119913/1‑50 TTATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGT > 1:1496522/1‑50 TATATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTG > 1:509109/1‑50 TATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT < 1:2956001/50‑1 TATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT > 1:4407999/1‑50 TATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATAGCAGTGCT < 1:1023413/50‑1 CGCTAATGATTAGCGGCAGCAACGCATAGCTTCACATAATTCTGGTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3184732‑3184781‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCT > NC_000913/3191698‑3191746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |