| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 131 [0] | [0] 130 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 125 (1.470) | 69/94 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
Only 100 of 136 total aligned reads displayed.
ATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651242‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:2804587/50‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:2993141/50‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA > 1:4354696/1‑49 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA < 1:1793855/49‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA < 1:6106146/49‑1 CCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA > 1:1261397/1‑50 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT < 1:5156303/50‑1 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT < 1:2965165/50‑1 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT < 1:3388229/50‑1 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT > 1:5287692/1‑50 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA < 1:1700363/49‑1 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA < 1:3184269/49‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:798054/50‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:1965260/1‑50 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:3475260/50‑1 ATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTG < 1:3362108/50‑1 ATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:3458619/1‑49 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGA > 1:5786706/1‑50 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATT < 1:90214/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:689581/1‑50 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:2437334/50‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:3253518/50‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:785108/1‑50 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:569197/1‑50 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:2099010/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:3067346/49‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:696758/50‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:6315588/50‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:393506/50‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:4775279/50‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:2562930/50‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:1568595/50‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:927348/1‑48 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG < 1:4209363/50‑1 TAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT > 1:403110/1‑50 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 1:1004869/1‑50 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT < 1:3266058/49‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT < 1:3015320/49‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCAC < 1:3286102/48‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTT < 1:3118347/50‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTT < 1:4178021/50‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:4727011/49‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 1:3667910/1‑49 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 1:2759345/1‑49 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:365572/50‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:5056117/1‑50 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:2394273/50‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:2465861/1‑50 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:2873703/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:1424301/1‑49 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT > 1:6629700/1‑49 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATC < 1:6008658/50‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:1669557/50‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:470388/50‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA > 1:6200755/1‑50 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:1195481/50‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA > 1:1248262/1‑50 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT > 1:6064506/1‑50 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:2455008/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:5430515/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:6702624/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:3784100/1‑50 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:1777438/1‑50 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT < 1:2637611/50‑1 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGA < 1:3023739/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:4520997/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT > 1:5087599/1‑49 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:5472755/49‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT > 1:6181765/1‑49 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:2495936/50‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:5488127/50‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA > 1:464744/1‑49 GAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA > 1:2752280/1‑49 GAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA > 1:5777035/1‑49 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAA < 1:3663049/50‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAA < 1:3493479/49‑1 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:4068856/1‑50 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA < 1:6515714/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAAT < 1:3188068/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:3442674/1‑49 AAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:1406093/1‑48 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAG < 1:1990711/50‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAG < 1:3375329/50‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATA < 1:3976476/49‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATA < 1:375293/49‑1 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAT > 1:6675837/1‑50 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAT < 1:2598115/50‑1 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT > 1:2833765/1‑50 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT < 1:1968684/50‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:2743338/1‑50 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:1048021/1‑50 TTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTT < 1:2081407/50‑1 TTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTA < 1:1698787/49‑1 TTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTA < 1:2200007/49‑1 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:6337717/1‑50 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:3587616/1‑50 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT < 1:1048728/49‑1 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG < 1:5990326/49‑1 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:827705/1‑49 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT < 1:5362783/49‑1 ATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651242‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |