| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,720,634 | Δ1,442 bp | IS150‑mediated | insJ–insK | insJ, insK |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3720634 | 3722075 | 1442 | 144 [0] | [0] 146 | insJ–insK | insJ,insK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3720633 | 0 (0.000) | 141 (1.590) | 61/98 | 0.0 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 3722076 = | 0 (0.000) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta | |||||
Only 100 of 141 total aligned reads displayed.
TATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3720585‑3720633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGT > NC_000913/3722076‑3722123 TATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA > 1:2049302/1‑50TATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA > 1:982142/1‑50TATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA > 1:1716171/1‑50 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACT < 1:5637427/50‑1 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACT > 1:4226961/1‑50 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA < 1:5674466/48‑1 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA < 1:1753399/48‑1 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATA < 1:1671632/47‑1 ATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT > 1:1030437/1‑50 ATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT > 1:1727055/1‑50 ATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT > 1:3246048/1‑50 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:2727703/1‑50 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT < 1:257275/50‑1 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:149195/1‑50 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:1464721/1‑50 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT < 1:3073552/50‑1 TTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:54314/1‑49 TTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:2154498/1‑49 TTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:350360/1‑49 TCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGA > 1:3030784/1‑50 TCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGA > 1:3350524/1‑50 gcGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATT > 1:5272612/3‑49 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 1:6111390/2‑50 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA < 1:4733571/49‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 1:705441/2‑50 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTT < 1:4239869/48‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATT < 1:3807620/47‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATT < 1:1548116/47‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGAT < 1:135768/46‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGAT < 1:5532094/46‑1 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTAT < 1:2029687/50‑1 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTAT < 1:3015532/50‑1 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 1:4055116/1‑49 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 1:3785253/1‑49 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG > 1:6468528/1‑50 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG < 1:5661181/50‑1 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG > 1:846106/1‑50 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG > 1:1249346/1‑50 TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT > 1:4605039/1‑50 TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT < 1:5277684/50‑1 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT > 1:6513401/1‑48 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT > 1:5978600/1‑48 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAG > 1:1060764/1‑50 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCA < 1:3498605/49‑1 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCA < 1:3861387/49‑1 CAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGG > 1:6032937/1‑50 CAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGG > 1:6190104/1‑50 CAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGG > 1:6340359/1‑50 AGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGT < 1:5944832/50‑1 AGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGT < 1:3309037/50‑1 AGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGT < 1:4684035/50‑1 AGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGT < 1:1865427/50‑1 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTG < 1:1594276/50‑1 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTG < 1:4306527/50‑1 CCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGG < 1:3480411/50‑1 CCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGG > 1:6178489/1‑50 CCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGG < 1:3871649/50‑1 CTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGG < 1:4346500/50‑1 TCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGG > 1:4027256/1‑50 CCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGC > 1:3821124/1‑50 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT > 1:5933764/1‑50 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGC < 1:6219466/49‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTT > 1:2136372/1‑50 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTT < 1:3917196/48‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTT < 1:2587766/48‑1 GTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGCGGGGCTTTTC > 1:863505/1‑50 TTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCT > 1:417188/1‑50 TTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCT > 1:2070736/1‑50 TTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTC < 1:1635254/49‑1 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTG < 1:1176526/50‑1 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTG > 1:2039972/1‑50 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTG > 1:5585403/1‑50 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTG < 1:3082441/50‑1 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCT < 1:691752/49‑1 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCT < 1:5923614/49‑1 TTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGT > 1:4148531/1‑50 TTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTC > 1:2281732/1‑50 TCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCT > 1:295197/1‑50 CCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCT < 1:1257983/49‑1 CAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGC > 1:2459969/1‑50 CAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGC > 1:6127476/1‑50 CAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGC > 1:2871834/1‑50 AACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCC < 1:4931375/50‑1 ACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCT < 1:4825603/50‑1 ACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCT < 1:6373836/50‑1 CGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTT > 1:1647470/1‑50 CGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTT > 1:3237053/1‑50 CGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTT < 1:3758900/50‑1 CGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTT > 1:5606085/1‑50 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTT > 1:2489469/1‑50 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTT < 1:2950839/50‑1 AGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTC < 1:4690686/50‑1 AGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTC < 1:2586421/50‑1 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCG < 1:675185/50‑1 TATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGG > 1:2970233/1‑50 TATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGG < 1:4080750/50‑1 TATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGG < 1:973266/50‑1 ATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGT > 1:3095601/1‑50 ATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGT > 1:5930093/1‑50 TAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGT < 1:1857516/49‑1 TATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3720585‑3720633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGT > NC_000913/3722076‑3722123 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |