| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,400,289 | Δ7 bp | coding (2‑8/309 nt) | hfq → | RNA‑binding protein Hfq |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4400289 | 4400295 | 7 | 128 [0] | [0] 128 | hfq | RNA‑binding protein Hfq |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4400288 | 0 (0.000) | 117 (1.380) | 68/94 | 0.0 | 100% | coding (1/309 nt) | hfq | RNA‑binding protein Hfq |
| ? | NC_000913 | 4400296 = | 0 (0.000) | coding (9/309 nt) | hfq | RNA‑binding protein Hfq | |||||
Only 100 of 128 total aligned reads displayed.
AGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4400240‑4400288‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGT > NC_000913/4400296‑4400344 AGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAG > 1:1578056/1‑50AGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAG < 1:5437516/50‑1AGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAG > 1:2976585/1‑50AGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAG > 1:5974932/1‑50AGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAA < 1:5951551/49‑1 GAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGG < 1:3288439/50‑1 GAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGG < 1:2593846/50‑1 AATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGG < 1:5175838/50‑1 AATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGG > 1:4895902/1‑50 AATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGG > 1:822559/1‑50 ATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGG < 1:4179464/50‑1 ATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGG < 1:2865151/50‑1 ATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGG < 1:2021804/50‑1 TCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGC < 1:6165988/50‑1 TCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGG > 1:2141104/1‑49 CGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGC > 1:2394078/1‑49 GAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAA > 1:4822759/1‑50 GAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCA < 1:5857430/49‑1 AAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAAT > 1:3775327/1‑50 AAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATC > 1:1956176/1‑50 AGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCT < 1:4265955/50‑1 AGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCT > 1:4094688/1‑50 AGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCT < 1:2436809/50‑1 GGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTT > 1:3092195/1‑50 GGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTT < 1:421470/50‑1 GTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTT < 1:1469335/50‑1 TTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTA < 1:933322/50‑1 CAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTAC < 1:4928753/49‑1 CAAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTAC < 1:1126448/49‑1 AAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAA < 1:2282924/50‑1 AAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAA < 1:6505387/50‑1 AAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTACA < 1:4986906/49‑1 AAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTAC > 1:1455125/1‑48 AAAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTAC > 1:1528252/1‑48 AAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAG < 1:941581/50‑1 AAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAG < 1:2674965/50‑1 AAGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTAC > 1:447492/1‑47 AGTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTAC > 1:2277517/1‑46 GTACAAATAAGCATATAAGGAACAGAGAGAAGGGGCAATCTTTAC > 1:4641934/1‑45 GTACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTAC > 1:2567802/1‑45 TACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATC > 1:6388418/1‑50 TACAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATC < 1:6125411/50‑1 CAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCG > 1:2947833/1‑50 CAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCG > 1:4488099/1‑50 CAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCG > 1:4556350/1‑50 CAAATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCG > 1:2691733/1‑50 AATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTT > 1:5465953/1‑50 ATAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTC > 1:468459/1‑50 TAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCC < 1:3806640/50‑1 TAAGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCC > 1:3387326/1‑50 AGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTG < 1:4474396/50‑1 AGCATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCT > 1:1084931/1‑49 CATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAA < 1:6233224/50‑1 CATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAA > 1:855520/1‑50 CATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAA > 1:944031/1‑50 CATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAA > 1:5372650/1‑50 CATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAA > 1:2815780/1‑50 CATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAA > 1:2027444/1‑50 ATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAAC > 1:4239946/1‑50 ATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAAC > 1:6059134/1‑50 ATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAAC > 1:2919748/1‑50 ATATAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAAC < 1:459555/50‑1 TAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCA < 1:767671/50‑1 TAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCA > 1:4678580/1‑50 TAAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGC < 1:5123177/49‑1 AAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCAC > 1:5663625/1‑50 AAGGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCAC > 1:1408836/1‑50 GGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTG > 1:3705896/1‑50 GGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTG > 1:4777813/1‑50 GGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTG > 1:3631030/1‑50 GGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTG < 1:2582994/50‑1 GGAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTG < 1:287475/50‑1 GAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGC > 1:4621774/1‑50 GAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGC > 1:5634220/1‑50 GAAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGC < 1:1284202/50‑1 AAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG > 1:5139005/1‑50 AAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG < 1:6197947/50‑1 AAAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG > 1:2302290/1‑50 AAAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGT < 1:4935339/50‑1 AAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTC < 1:2126361/50‑1 AAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTC > 1:4057892/1‑50 AAGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTC > 1:1259375/1‑50 AGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCG > 1:5735918/1‑50 AGAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCG < 1:4005423/50‑1 GAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGG > 1:1038344/1‑50 GAGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGG < 1:1233737/50‑1 AGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGG < 1:3145547/50‑1 AGAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGG < 1:251840/50‑1 GAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGA < 1:1270395/50‑1 GAGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGA < 1:1707489/50‑1 AGAAGGGGCAATCTTTACAATATCCGTTCCTGAACGCACTGCGTCGGGAA < 1:4902037/50‑1 AGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAA < 1:299982/50‑1 GAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAAC < 1:780681/50‑1 AAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACG < 1:6268445/50‑1 AAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACG < 1:4758496/50‑1 AAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACG > 1:5412138/1‑50 AAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACG > 1:2793306/1‑50 AGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGT < 1:4933262/50‑1 AGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGT > 1:1074496/1‑50 AGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGT > 1:2309966/1‑50 AGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4400240‑4400288‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGT > NC_000913/4400296‑4400344 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |