| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 257,908 | Δ776 bp | insB9–[crl] | insB9, insA9, [crl] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 257908 | 258683 | 776 | 107 [0] | [1] 110 | insB9–[crl] | insB9,insA9,[crl] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 257907 | 0 (0.000) | 95 (1.290) | 52/82 | 0.0 | 100% | intergenic (+8/+16) | crl/insB9 | RNA polymerase holoenzyme assembly factor Crl/IS1 transposase B |
| ? | NC_000913 | 258684 = | 0 (0.000) | pseudogene (9/331 nt) | crl | RNA polymerase holoenzyme assembly factor Crl | |||||
Only 100 of 110 total aligned reads displayed.
AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAAC > NC_000913/258635‑258733 | agattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaa < 1:1285970‑M2/1‑1 (MQ=255)agattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaa < 1:537651‑M2/1‑1 (MQ=255) gattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAg > 1:728845‑M2/49‑50 (MQ=255) gattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAg < 1:6466720‑M2/2‑1 (MQ=255) gattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAg > 1:6112688‑M2/49‑50 (MQ=255) gattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAg < 1:1324772‑M2/2‑1 (MQ=255) gattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAg > 1:3609277‑M2/49‑50 (MQ=255) gattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAg < 1:4964577‑M2/2‑1 (MQ=255) attgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt < 1:3592326‑M2/3‑1 (MQ=255) attgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt > 1:1310811‑M2/48‑50 (MQ=255) attgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt > 1:5231340‑M2/48‑50 (MQ=255) ttgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTg < 1:1756410‑M2/4‑1 (MQ=255) ttgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTg < 1:6040849‑M2/4‑1 (MQ=255) tgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTg > 1:4758470‑M2/46‑49 (MQ=255) tgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTg > 1:3659824‑M2/46‑49 (MQ=255) tgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTg > 1:3168284‑M2/46‑49 (MQ=255) gatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGc > 1:3811792‑M2/45‑49 (MQ=255) atcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCa < 1:5711308‑M2/6‑1 (MQ=255) atcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCa < 1:4914956‑M2/6‑1 (MQ=255) atcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCa < 1:1228187‑M2/6‑1 (MQ=255) tcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCaaa < 1:5915900‑M2/8‑1 (MQ=255) tcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCa > 1:1169479‑M2/43‑48 (MQ=255) aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCa > 1:472854‑M2/41‑46 (MQ=255) aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAg < 1:117594‑M2/9‑1 (MQ=255) aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAg < 1:1698475‑M2/9‑1 (MQ=255) aaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGa > 1:28017‑M2/40‑49 (MQ=255) aaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGAt < 1:3042709‑M2/11‑1 (MQ=255) aaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGAt < 1:1856740‑M2/11‑1 (MQ=255) aaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATa < 1:2577727‑M2/12‑1 (MQ=255) aaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATa < 1:2289119‑M2/12‑1 (MQ=255) aaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATaa < 1:1672136‑M2/13‑1 (MQ=255) aatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAAt < 1:3053130‑M2/14‑1 (MQ=255) atttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATc > 1:4834914‑M2/36‑50 (MQ=255) tttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATc > 1:2223898‑M2/35‑49 (MQ=255) tttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCg < 1:555009‑M2/16‑1 (MQ=255) taccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGa < 1:5133972‑M2/17‑1 (MQ=255) taccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGa < 1:4543420‑M2/17‑1 (MQ=255) taccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGa < 1:4487501‑M2/17‑1 (MQ=255) taccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGAt > 1:6608590‑M2/33‑50 (MQ=255) accgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGAt < 1:1643650‑M2/18‑1 (MQ=255) accgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGAt < 1:6638455‑M2/18‑1 (MQ=255) ccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGAtt < 1:6692558‑M2/19‑1 (MQ=255) ccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTc < 1:1911919‑M2/20‑1 (MQ=255) ccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTc > 1:4989608‑M2/31‑50 (MQ=255) cgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCt > 1:1643941‑M2/30‑50 (MQ=255) cgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCt < 1:551016‑M2/21‑1 (MQ=255) cgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCt < 1:5238407‑M2/21‑1 (MQ=255) cgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCt < 1:3751356‑M2/21‑1 (MQ=255) gcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCtt < 1:3778827‑M2/22‑1 (MQ=255) cactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCttt > 1:4013490‑M2/28‑50 (MQ=255) cactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCttt > 1:4745143‑M2/28‑50 (MQ=255) actaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCtttt > 1:4206676‑M2/27‑50 (MQ=255) actaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCtttt > 1:5566173‑M2/27‑50 (MQ=255) actaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCtttt > 1:2408322‑M2/27‑50 (MQ=255) ctaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCttttt < 1:5495846‑M2/25‑1 (MQ=255) ctaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCttttt < 1:3942762‑M2/25‑1 (MQ=255) ctaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCttttt < 1:764520‑M2/25‑1 (MQ=255) taggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTc > 1:6530447‑M2/25‑50 (MQ=255) aggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTc > 1:38689‑M2/24‑49 (MQ=255) ggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTc < 1:6254038‑M2/26‑1 (MQ=255) ggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTc < 1:348563‑M2/26‑1 (MQ=255) ggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTc < 1:6601262‑M2/26‑1 (MQ=255) gcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAt < 1:1266937‑M2/29‑1 (MQ=255) gcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAt < 1:5188010‑M2/29‑1 (MQ=255) gcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAt < 1:1757467‑M2/29‑1 (MQ=255) cccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAtt > 1:6692193‑M2/21‑50 (MQ=255) cccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAtt < 1:178806‑M2/30‑1 (MQ=255) cccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAtt < 1:4696071‑M2/30‑1 (MQ=255) ccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTg < 1:4236037‑M2/31‑1 (MQ=255) ccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTg > 1:6128033‑M2/20‑50 (MQ=255) gtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTc < 1:5062039‑M2/33‑1 (MQ=255) gtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTc < 1:5802849‑M2/33‑1 (MQ=255) tatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCt < 1:5841701‑M2/34‑1 (MQ=255) tatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCt < 1:4233678‑M2/34‑1 (MQ=255) atattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTg > 1:5146308‑M2/16‑50 (MQ=255) atattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTg > 1:4291691‑M2/16‑50 (MQ=255) tattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTgg < 1:1184315‑M2/36‑1 (MQ=255) tattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTg < 1:618906‑M2/35‑1 (MQ=255) tattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTg < 1:4768654‑M2/35‑1 (MQ=255) tattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTg < 1:1155983‑M2/35‑1 (MQ=255) ttcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGc < 1:2090106‑M2/37‑1 (MQ=255) tcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTg > 1:851523‑M2/12‑50 (MQ=255) tcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTg > 1:5526096‑M2/12‑50 (MQ=255) gtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTa < 1:618346‑M2/41‑1 (MQ=255) gtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTa < 1:5375247‑M2/41‑1 (MQ=255) gtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTa < 1:5696114‑M2/41‑1 (MQ=255) tgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTAt > 1:4118761‑M2/9‑50 (MQ=255) aaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATg < 1:17107‑M2/43‑1 (MQ=255) aaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGc > 1:6046600‑M2/7‑50 (MQ=255) aaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGc > 1:4299502‑M2/7‑50 (MQ=255) aaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGc > 1:4964734‑M2/7‑50 (MQ=255) ggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGt < 1:4494178‑M2/46‑1 (MQ=255) gtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGt > 1:5309229‑M2/4‑49 (MQ=255) gtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTc < 1:5164807‑M2/47‑1 (MQ=255) gTAAGTGCAAAAATAATCGAATCTTGATCAATTGTAAGGCTGAATGCgg > 1:5483864/1‑48 (MQ=255) taAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTc > 1:4738238‑M2/3‑49 (MQ=255) taAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCa < 1:3133231‑M2/48‑1 (MQ=255) taAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCa < 1:5959869‑M2/48‑1 (MQ=255) aAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCaa > 1:5588924‑M2/2‑50 (MQ=255) aGTGCAAAGATAATCGATTCTTTTGCGATTGTCTGGCTGTATGCGTCaa < 1:1463369/49‑1 (MQ=255) | AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAAC > NC_000913/258635‑258733 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |