Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	2466950	2467064	115	2 [1]	[1] 2	intS	CPS‑53 (KpLE1) prophage; prophage CPS‑53 integrase

TTTAGTGCGATTTACAAGGAATGGTACGAGCACAAGAAGCAAGTATGGTCAGTAGGGTATGCAACTGAACTTGCCAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGA  >  NC_000913/2466821‑2467012                                                                                                                                 |                                                                tttAGTGCGATTTACAAGGAATGGTACGAGCACAAGAAGCAAGTATGGTCAGTAGGGTATGCAACTGAACTTGCCAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGGAATTCAGGat                                                                 >  1:212718/1‑129 (MQ=255)                                                                aacgAACTTGGCAAAAAGTGTGACGACGACATTTTAACTATCAGTGGGGGCCTTGAAATTCAGGAAATGGAGCCGATGCAACTGCTGGAAGTAAGCCGCAGGTTGGAAGATCGCGGTGCAATGGAACGa  <  1:12436/126‑1 (MQ=255)                                                                                                                                 |                                                                TTTAGTGCGATTTACAAGGAATGGTACGAGCACAAGAAGCAAGTATGGTCAGTAGGGTATGCAACTGAACTTGCCAAAATGTTTGACGACGACATTTTACCTATCATTGGCGGCCTTGAAATTCAGGATATTGAGCCGATGCAACTGCTGGAAGTAATCCGCAGGTTTGAAGATCGCGGTGCAATGGAACGA  >  NC_000913/2466821‑2467012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑