Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	2559022	2559059	38	2 [1]	[1] 2	intZ	CPZ‑55 prophage; putative phage integrase IntZ

GCCGCACAGCCGCAGGACAAGCCCTATAAACTCACCGATTCACTGACGCCGGGGCTGTTTTTGCTGGTGCATCCCAACGGTTCGAAATACTGGCGATTCAGGTATTGGCTGAATAAACGAG‑AGTTTTTGCA  >  NC_000913/2558894‑2559024                                                                                                                                 |    gccgcACAGCCGCAGGACAAGCCCTATAAACTCACCGATTCACTGACGCCGGGGCGGTTTTTGCTGGTGAATCCCACCGGTCCAAAATACGGGCGATTCGGTTTTGGGCGGAATAAA‑GAGAAGttttta    >  1:84919/1‑128 (MQ=255)   cgcACAGCCGCAGGACAAGCCCTATAAACTCACCGATTCACTGACGCCGGGGCTGTTTTTGCTGGTGCATCCCAACGGGTCGAAATACTGGCGATTCAGGTATTGGCTGAATAAACGAG‑AGTTTTTGCa  >  1:137562/1‑129 (MQ=255)                                                                                                                                 |    GCCGCACAGCCGCAGGACAAGCCCTATAAACTCACCGATTCACTGACGCCGGGGCTGTTTTTGCTGGTGCATCCCAACGGTTCGAAATACTGGCGATTCAGGTATTGGCTGAATAAACGAG‑AGTTTTTGCA  >  NC_000913/2558894‑2559024

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑