Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	4636991	4637059	69	2 [1]	[1] 3	creC	sensory histidine kinase CreC

TCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGA  >  NC_000913/4637047‑4637188              |                                                                                                                                 tCGGGCTGGAATGACGTCTGGCTAACGTTGCGGGGTAAGTATGGTGCGGGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTCGCGGCtt               <  1:333854/129‑1 (MQ=255)              aCGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGAATTTTGCCGCACCGATTATGGAGGGCCCCGGGCTTTTTGCGGTTTTGa  >  1:154668/1‑129 (MQ=255)              aCGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGGGTGTTATGTTGCGCCACCGATTATGGCTGGCACGGGGCCTTTTGGCGtttta   >  1:167101/1‑127 (MQ=255)              |                                                                                                                                 TCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCCGCACCGATTATGGACGGCTCGCGGCTTATTGGCGTTTTGA  >  NC_000913/4637047‑4637188

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑