| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,795,396 | C→A | Q382K (CAG→AAG) | gabP → | 4‑aminobutyrate:H(+) symporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,795,396 | 0 | C | A | 100.0% | 22.9 / NA | 9 | Q382K (CAG→AAG) | gabP | 4‑aminobutyrate:H(+) symporter |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (5/4); total (5/4) | |||||||||||
GGTGGTGGTGAACTATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGTTGCGGATGCGCAAAATTCTGC‑GAGCAGAAGGAAGCGAAATTCGC‑TTGCGAATGTGGCTTTATCCGTGGCTCACCTGGCTAGTCATCGGCTTTATTACCTTTGTGTTGGTAGTGATGCTATT > NC_000913/2795296‑2795520 | ggtggtggtGAACTATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGACGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCAAAGTTCCGGAT‑CGCCAAATTATgtgcag > 1:186977/1‑123 (MQ=255) ggcCTGCGAAGGTATTTAAATTTCGGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCAAAGTTGCGGATGCGCAAAATTCTGC‑GAGCAGAAGGAAGCGAAATTCGC‑t < 1:186182/128‑1 (MQ=255) aGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTAATCGCCGTTTCAAAGTTGCGGATGCGCAAAATTCTGC‑GAGCAGAAGGAAGCGAAATTGCC‑TTGGGatttg > 1:371051/1‑125 (MQ=255) aaaTTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCAAAGTTGCGGAGGCGCAAATTTCT‑C‑GGGCAAGAGGGAGGCAAATTTGCTTTGCGAGTG‑GGGTTTATc > 1:259973/1‑129 (MQ=255) tATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCAAAGTTGCGGATGCGCAAAATTCTGC‑GAGCAGAAGGAAGCGAAATTCGC‑TTGCGAATGTGGCTTTATCCGTGGCTCACCTGGCTAGTCATCgg > 1:201081/1‑129 (MQ=255) tgggTTTATTT‑GGCCTCGCCGTTTCAAAGTTTCGGATGCGCAAAATTCTGG‑GAGCAGAAGGAAGCGAAATTCGC‑TTGCGAATGTGGCTTTATCCGTGGCTCACCTGGCTAGTCATCGGCTTTATTAcc < 1:119612/126‑1 (MQ=255) ccccGCCGTTTCAAAGTTGCGGATGCCCAAAATTCTGC‑GAGCAGAAGGAAGCGAAATTCGC‑TTGCGAATGTGGCTTTATCCGTGGCTCACCTGGCTAGTCATCGGCTTTATTACCTTTGTGTTGGTAg < 1:191211/125‑1 (MQ=255) tcgtccGTTTAAAAGTTGGGAATGCG‑AAAATTCGGCGGACCGAAAGGAAG‑GGAAGTCGC‑CTGGGAATGTGGCTTTATCCGTGGCTTACCTGGCTAGTCATCGGCTTTATTACCTTTGTGTTGGTAGTg < 1:328846/124‑1 (MQ=255) ttCAAAGTTGCGGATGCGCAAAATTCTGC‑GAGCAGAAGGAAGCGAAATTCGC‑TTGCGAATTTGGCTTTATCCGTGGCTCACCTTGCTAGTAAACGGCCTCATTTACGTTGTGTTGTTAGTGATGCTAtt > 1:359259/1‑129 (MQ=255) | GGTGGTGGTGAACTATTACGCGCCTGCGAAGGTATTTAAATTTCTGATCGACAGCTCCGGCGCTATCGCCCTGCTGGTTTATTTAGTCATCGCCGTTTCACAGTTGCGGATGCGCAAAATTCTGC‑GAGCAGAAGGAAGCGAAATTCGC‑TTGCGAATGTGGCTTTATCCGTGGCTCACCTGGCTAGTCATCGGCTTTATTACCTTTGTGTTGGTAGTGATGCTATT > NC_000913/2795296‑2795520 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |