Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 4,188,282 | G→A | R978H (CGT→CAT) | rpoC → | RNA polymerase subunit beta' |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,188,282 | 0 | G | A | 100.0% | 14.0 / NA | 9 | R978H (CGT→CAT) | rpoC | RNA polymerase subunit beta' |
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (2/7); total (2/7) |
CGGCTGCTGAATCCAGCATCCAAGTGAAAAACAAAGGTAGCATCAAGCTCAGCAACGTGAAGTCGGTTGTGAACTCCAGCGGTAAACTGGTTATCACTTCCCGTAATACTGAACTGAAACTGATCGACGAATTCGGTCGTACTAAAGAAAGCTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAA > NC_000913/4188180‑4188395 | cGGCTGCTGAATCCAGCATCCAAGTGAAAAACAAAGGTAGCATCAAGCCCAGCAACGTGAAGTCGGTTTTGAACTCCAGCGGTAAACTGGTTTTAACTTCCCATAAACCTAACCTGAAACTGGTcacca > 1:159323/1‑125 (MQ=255) tgctgAATCCAGCATCCAAGTGAAAAACAAAGGTAGCATCAAGCTCAGCAACGTGAAGTCGGTTGTGAACTCTAGCGGTAAACTGGTTATCACTTCCCATAATACTGAACTGAAACTGATCGACGAAtt < 1:175326/129‑1 (MQ=255) ctcgAAACCCGCATCCAAGGGAAAAACAAAGGTAGAATCAAGCCCAGCAACGGTAAGTCGGTTGTGAACTCCAGCGGTAAACTGGTTATCACTTCCCATAATACTGAACTGAAACTGATCGACGAATTc < 1:167842/126‑1 (MQ=255) aTCCAAGTGAAAAACAAAGGTAGCATCAAGCTCAGCAACGTGAAGTCGGTTGTGAACTCCAGCGGTAAACTGGTTATCACTTCCCATAATACTGAACTGAAACGGAACGACGAATTCGGTGGTACaaa > 1:184720/1‑128 (MQ=255) aggAAAAACCAAGGGAGACTCAAGGCCAGGAACGTGAAGTCGGTTGTGAACTCCCGCGGTAAATTGGGTAACACTTCCCATAATACTGAACTGAAACTGATCGACGAATTCGGTCGTACTAAAGAAAGc < 1:362317/127‑1 (MQ=255) ggTCGCAACAAGCTCAGAAACGTGAAGTTGGTTGTGAACTCAAGCGGTAAACTGGTTATCACTTCCCATAATACTGAACTGAAACTGATCGACGAATTCGGTCGTACTAAAGAAAGCTACAAAGTACCt < 1:155318/129‑1 (MQ=255) aaaaaaGCCCAGCACCGGGAGGTGGGTTGT‑AACCCCAGAGGTAAACTGGTTATCCCTTCCCATAATACTGAACTGAAACTGATCGACGAATTCGGTCGTACTAAAGAAAGCTACAAAGTACCTTACGGt < 1:76953/125‑1 (MQ=255) aCTCCCGGGGGAAACTGGTTAACACCTCCCATAATTATGAACTGAATCCGATCGACGAATTCGGTCGTACTAAAGAAAGCTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAgg < 1:183513/129‑1 (MQ=255) ttGGTTATCA‑TTCCCAAAAAACCGAACCTGAACTGGTCGCCAAATTCGGTCGTACGAAAGAAAGCTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGaaa < 1:326468/128‑1 (MQ=255) | CGGCTGCTGAATCCAGCATCCAAGTGAAAAACAAAGGTAGCATCAAGCTCAGCAACGTGAAGTCGGTTGTGAACTCCAGCGGTAAACTGGTTATCACTTCCCGTAATACTGAACTGAAACTGATCGACGAATTCGGTCGTACTAAAGAAAGCTACAAAGTACCTTACGGTGCGGTACTGGCGAAAGGCGATGGCGAACAGGTTGCTGGCGGCGAAA > NC_000913/4188180‑4188395 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |