mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence (highest frequency 20 of 21 shown, sorted by frequency from high to low) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,270,305 | 0 | G | A | 74.4% | 54.6 / 15.0 | 40 | noncoding (288/377 nt) | rnpB | RNase P catalytic RNA component |
| * | NC_000913 | 3,270,325 | 0 | T | A | 73.7% | 49.8 / 16.9 | 39 | noncoding (268/377 nt) | rnpB | RNase P catalytic RNA component |
| * | NC_000913 | 3,270,307 | 0 | T | C | 72.5% | 56.8 / 11.0 | 40 | noncoding (286/377 nt) | rnpB | RNase P catalytic RNA component |
| * | NC_000913 | 3,270,310 | 0 | G | A | 72.5% | 62.4 / 10.8 | 40 | noncoding (283/377 nt) | rnpB | RNase P catalytic RNA component |
| * | NC_000913 | 3,270,351 | 0 | G | A | 72.2% | 16.0 / 18.0 | 38 | noncoding (242/377 nt) | rnpB | RNase P catalytic RNA component |
| * | NC_000913 | 3,270,311 | 0 | T | C | 70.0% | 48.5 / 17.2 | 40 | noncoding (282/377 nt) | rnpB | RNase P catalytic RNA component |
| * | NC_000913 | 3,270,281 | 0 | C | G | 69.2% | 74.6 / 10.3 | 39 | noncoding (312/377 nt) | rnpB | RNase P catalytic RNA component |
| * | NC_000913 | 3,270,283 | 0 | C | A | 69.2% | 70.3 / 10.4 | 39 | noncoding (310/377 nt) | rnpB | RNase P catalytic RNA component |
| * | NC_000913 | 3,270,285 | 0 | G | C | 69.2% | 62.5 / 16.8 | 39 | noncoding (308/377 nt) | rnpB | RNase P catalytic RNA component |
| * | NC_000913 | 3,270,324 | 0 | T | . | 68.8% | 0.1 / 47.8 | 39 | noncoding (269/377 nt) | rnpB | RNase P catalytic RNA component |
| * | NC_000913 | 3,270,327 | 0 | T | A | 68.8% | 31.2 / 14.2 | 39 | noncoding (266/377 nt) | rnpB | RNase P catalytic RNA component |
| * | NC_000913 | 3,270,342 | 0 | C | T | 61.1% | 13.2 / 14.2 | 37 | noncoding (251/377 nt) | rnpB | RNase P catalytic RNA component |
| * | NC_000913 | 3,270,329 | 0 | A | G | 56.4% | 21.2 / 24.3 | 39 | noncoding (264/377 nt) | rnpB | RNase P catalytic RNA component |
| * | NC_000913 | 3,270,331 | 0 | C | T | 55.9% | ‑6.6 / 26.1 | 38 | noncoding (262/377 nt) | rnpB | RNase P catalytic RNA component |
| * | NC_000913 | 2,464,189 | 0 | G | T | 54.5% | 5.6 / 10.7 | 11 | intergenic (+119/+63) | yfdF/mlaA | protein YfdF/intermembrane phospholipid transport system ‑ outer membrane lipoprotein MlaA |
| * | NC_000913 | 3,508,361 | 0 | A | C | 54.5% | 7.9 / 10.9 | 11 | V77G (GTG→GGG) | php | putative hydrolase |
| * | NC_000913 | 3,270,357 | 0 | A | G | 47.1% | ‑1.0 / 15.4 | 17 | noncoding (236/377 nt) | rnpB | RNase P catalytic RNA component |
| * | NC_000913 | 4,175,789 | 0 | T | C | 45.5% | 5.7 / 11.5 | 12 | noncoding (36/76 nt) | thrT | tRNA‑Thr |
| * | NC_000913 | 4,175,794 | 0 | G | T | 45.5% | ‑0.2 / 12.8 | 11 | noncoding (41/76 nt) | thrT | tRNA‑Thr |
| * | NC_000913 | 4,175,803 | 0 | G | C | 45.5% | ‑2.6 / 13.6 | 11 | noncoding (50/76 nt) | thrT | tRNA‑Thr |