| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,286,401 | Δ3,780 bp | [yejO]–[yejO] | [yejO], insH‑8, [yejO] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2286401 | 2290180 | 3780 | 146 [0] | [0] 146 | [yejO]–[yejO] | [yejO],insH‑8,[yejO] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2286400 | 0 (0.000) | 145 (1.330) | 73/98 | 0.0 | 100% | pseudogene (2515/2525 nt) | yejO | adhesin‑like autotransporter YejO |
| ? | NC_000913 | 2290181 = | 0 (0.000) | intergenic (‑1/‑319) | yejO/narP | adhesin‑like autotransporter YejO/DNA‑binding transcriptional dual regulator NarP | |||||
Only 100 of 145 total aligned reads displayed.
CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2286352‑2286400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAG > NC_000913/2290181‑2290229 CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:26729/1‑50 AGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTG < 1:1654507/50‑1 AGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:2252545/1‑49 AGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:3869391/1‑49 AGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:5253298/1‑49 AGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:6446951/1‑49 GACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:6211860/1‑48 GACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:1909655/1‑48 GACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:1400984/1‑48 GACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:8071315/1‑48 GACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:840722/1‑48 ACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAG < 1:521668/50‑1 ACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAG > 1:235904/1‑50 CGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCT > 1:3254795/1‑50 GTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTT > 1:519131/1‑50 GACACATCACATCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTT > 1:6395936/1‑49 GACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTT > 1:7133487/1‑49 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCA < 1:7029786/50‑1 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCA > 1:7035296/1‑50 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCA > 1:7485111/1‑50 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCA > 1:1067962/1‑50 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCA < 1:2416699/50‑1 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTC < 1:1026628/49‑1 CACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCAT < 1:7550073/50‑1 CACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCAT < 1:6998321/50‑1 CACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCAT < 1:1221075/50‑1 CATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC < 1:3329759/50‑1 CATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC > 1:5651012/1‑50 CATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC > 1:6615527/1‑50 ATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC > 1:1592650/1‑49 TCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTA > 1:3611472/1‑50 TCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTA > 1:5580321/1‑50 TCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTA < 1:301185/50‑1 CACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTAT > 1:7068513/1‑50 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATG < 1:4947686/50‑1 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATG < 1:835010/50‑1 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTAT < 1:2910155/49‑1 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTAT > 1:1480076/1‑49 CAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGA < 1:3728069/50‑1 CAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATG > 1:3409054/1‑49 AGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAA < 1:1344470/50‑1 GCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAA < 1:4125479/50‑1 GCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAA > 1:6089351/1‑50 GCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAA > 1:3289617/1‑50 GCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAA < 1:7686162/50‑1 CTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATT < 1:253672/50‑1 CTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT > 1:1408929/1‑49 TGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATT > 1:2969939/1‑49 GTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAA > 1:7999605/1‑50 GTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAA > 1:4559698/1‑50 TTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAAT < 1:1520432/50‑1 TTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTA < 1:3292915/48‑1 TTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTA < 1:3931372/48‑1 TTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATT > 1:7987679/1‑50 TTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATT > 1:1928390/1‑50 TATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATT < 1:7764622/49‑1 TTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCT > 1:6141378/1‑50 TTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGT > 1:7356874/1‑50 TTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTG < 1:4774562/49‑1 TTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTG < 1:2515371/49‑1 TCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGT > 1:4734585/1‑49 TCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGT > 1:5606753/1‑49 CTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTT > 1:1982267/1‑49 CTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTT < 1:2777804/49‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAA < 1:4292206/50‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAA < 1:1031174/49‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAA < 1:8197210/49‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAA > 1:6674357/1‑48 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTA < 1:3752635/47‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTA < 1:2380394/47‑1 TTATCAGAACGTCCTGAGATTTCATCCTATGAAATTAATTGCTGTTAAA < 1:4390269/49‑1 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 1:4169654/1‑49 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG < 1:1116427/49‑1 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 1:3071413/1‑49 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG < 1:3114416/49‑1 TCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCA > 1:4346495/1‑50 TCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCA < 1:6929041/50‑1 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT > 1:3216580/1‑50 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT > 1:4563755/1‑50 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT > 1:4933874/1‑50 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAT < 1:1018139/49‑1 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAT < 1:7229862/49‑1 GAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTG < 1:2098143/50‑1 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG > 1:3019605/1‑50 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG < 1:6790178/50‑1 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG > 1:742162/1‑50 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG < 1:2744178/50‑1 ACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGG < 1:7485597/50‑1 CGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGT < 1:3205718/50‑1 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:293761/1‑50 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:3660499/1‑50 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA < 1:7714405/50‑1 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:6778884/1‑50 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA < 1:7333094/50‑1 TCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTAC < 1:588289/50‑1 TCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTAC < 1:2430627/50‑1 TCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTAC < 1:1656600/50‑1 CCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:7625039/1‑48 CTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAG < 1:7426345/50‑1 CTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:2625003/1‑47 CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2286352‑2286400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAG > NC_000913/2290181‑2290229 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |