| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 133 [0] | [0] 130 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 130 (1.200) | 72/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
Only 100 of 133 total aligned reads displayed.
ATAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAATGGCGCGTTCCAAAACTGCTCAGCCAAAACACTCACTGCGTAAAATC > NC_000913/167434‑167531 | ataatCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCa < 1:4050936/50‑1 (MQ=255)ataatCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCa > 1:3133746/1‑50 (MQ=255)ataatCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCa < 1:5550412/50‑1 (MQ=255) tAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAt > 1:542346‑M1/1‑49 (MQ=255) tAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAt < 1:7762542‑M1/50‑2 (MQ=255) tAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAt < 1:5197923‑M1/50‑2 (MQ=255) tAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAt > 1:4131072‑M1/1‑49 (MQ=255) aaTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAtt > 1:4731317‑M1/1‑48 (MQ=255) aTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc > 1:6539371‑M1/1‑47 (MQ=255) aTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc > 1:6628879‑M1/1‑47 (MQ=255) aTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc < 1:6256128‑M1/50‑4 (MQ=255) tCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcc < 1:5430615‑M1/50‑5 (MQ=255) tCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc > 1:3882242‑M1/1‑46 (MQ=255) cATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcca > 1:5883070‑M1/1‑45 (MQ=255) cATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcca > 1:2962026‑M1/1‑45 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccat < 1:7817210‑M1/50‑7 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccat < 1:4566428‑M1/50‑7 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcca < 1:4269606‑M1/49‑6 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcca < 1:3971121‑M1/49‑6 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcca < 1:4842962‑M1/49‑6 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcca < 1:1163038‑M1/49‑6 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcca > 1:6246286‑M1/1‑44 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcca > 1:1755382‑M1/1‑44 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcca < 1:793641‑M1/49‑6 (MQ=255) tctcGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccata > 1:1671358‑M1/1‑42 (MQ=255) tctcGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccata > 1:6491837‑M1/1‑42 (MQ=255) ctcGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatat > 1:4640910‑M1/1‑41 (MQ=255) tcGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataa > 1:5718603‑M1/1‑40 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacg < 1:4044347‑M1/50‑13 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacg < 1:8218994‑M1/50‑13 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacg < 1:3375160‑M1/50‑13 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacg > 1:1619449‑M1/1‑38 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacg > 1:597993‑M1/1‑38 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataac < 1:6925119‑M1/49‑12 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataa < 1:7341902‑M1/48‑11 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataa < 1:211972‑M1/48‑11 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatata < 1:4417136‑M1/47‑10 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatata < 1:2204871‑M1/47‑10 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatata < 1:6475400‑M1/47‑10 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg < 1:3430109‑M1/50‑14 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg > 1:2901807‑M1/1‑37 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg > 1:6097828‑M1/1‑37 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg < 1:7048745‑M1/50‑14 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg > 1:6797880‑M1/1‑37 (MQ=255) ttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggc > 1:5613322‑M1/1‑36 (MQ=255) tACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggcc > 1:717841‑M1/1‑35 (MQ=255) tACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggcc > 1:6105055‑M1/1‑35 (MQ=255) tACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggc < 1:1957783‑M1/49‑15 (MQ=255) aCGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccc > 1:8309228‑M1/1‑34 (MQ=255) aCGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggcc < 1:7527392‑M1/49‑16 (MQ=255) gTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccctg > 1:3967451‑M1/1‑32 (MQ=255) ttATCATTCACTTTACATCAGAGATATACCAttccatataacggccctg > 1:4991892‑M1/1‑31 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtacg > 1:4345242‑M1/1‑28 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtacg > 1:1674468‑M1/1‑28 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtacg < 1:3006055‑M1/50‑23 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtacg < 1:3808483‑M1/50‑23 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtac < 1:2057880‑M1/49‑22 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtac < 1:3947050‑M1/49‑22 (MQ=255) cATTCACTTTACATCAGAGATATACCAttccatataacggccctgtacgc > 1:5494626‑M1/1‑27 (MQ=255) aTTCACTTTACATCAGAGATATACCAttccatataacggccctgtacgc < 1:5301833‑M1/49‑24 (MQ=255) ttCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcct < 1:3733728‑M1/50‑26 (MQ=255) ttCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcct < 1:5377073‑M1/50‑26 (MQ=255) tCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcctg > 1:339372‑M1/1‑24 (MQ=255) tCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcctg > 1:182341‑M1/1‑24 (MQ=255) cACTTTACATCAGAGATATACCAttccatataacggccctgtacgcctg < 1:2443087‑M1/49‑27 (MQ=255) cACTTTACATCAGAGATATACCAttccatataacggccctgtacgcctg < 1:1530563‑M1/49‑27 (MQ=255) aCTTTACATCAGAGATATACCAttccatataacggccctgtacgcctgga < 1:1039928‑M1/50‑29 (MQ=255) aCTTTACATCAGAGATATACCAttccatataacggccctgtacgcctgg < 1:6485478‑M1/49‑28 (MQ=255) aCTTTACATCAGAGATATACCAttccatataacggccctgtacgcctgg < 1:909815‑M1/49‑28 (MQ=255) cTTTACATCAGAGATATACCAttccatataacggccctgtacgcctggac > 1:1291136‑M1/1‑21 (MQ=255) tttACATCAGAGATATACCAttccatataacggccctgtacgcctggacg > 1:7698796‑M1/1‑20 (MQ=255) tACATCAGAGATATACCAttccatataacggccctgtacgcctggacgga > 1:6624291‑M1/1‑18 (MQ=255) tACATCAGAGATATACCAttccatataacggccctgtacgcctggacgg < 1:4291722‑M1/49‑32 (MQ=255) tACATCAGAGATATACCAttccatataacggccctgtacgcctggacg < 1:1886815‑M1/48‑31 (MQ=255) tACATCAGAGATATACCAttccatataacggccctgtacgcctggacg < 1:4791497‑M1/48‑31 (MQ=255) tACATCAGAGATATACCAttccatataacggccctgtacgcctggacg < 1:7097595‑M1/48‑31 (MQ=255) aCATCAGAGATATACCAttccatataacggccctgtacgcctggacgga > 1:3587646‑M1/1‑17 (MQ=255) aCATCAGAGATATACCAttccatataacggccctgtacgcctggacgga > 1:1514646‑M1/1‑17 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggata < 1:3287612‑M1/50‑35 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggat > 1:7739905‑M1/1‑16 (MQ=255) aTCAGAGATATACCAttccatataacggccctgtacgcctggacggataa < 1:2954402‑M1/50‑36 (MQ=255) cAGAGATATACCAttccatataacggccctgtacgcctggacggataaag > 1:5792309‑M1/1‑13 (MQ=255) cAGAGATATACCAttccatataacggccctgtacgcctggacggataaag > 1:3561066‑M1/1‑13 (MQ=255) agagATATACCAttccatataacggccctgtacgcctggacggataaagc < 1:3567085‑M1/50‑39 (MQ=255) agagATATACCAttccatataacggccctgtacgcctggacggataaagc < 1:2763377‑M1/50‑39 (MQ=255) agagATATACCAttccatataacggccctgtacgcctggacggataaagc < 1:7715823‑M1/50‑39 (MQ=255) agaTATACCAttccatataacggccctgtacgcctggacggataaagcgt > 1:5265931‑M1/1‑10 (MQ=255) gaTATACCAttccatataacggccctgtacgcctggacggataaagcgtt > 1:4387074‑M1/1‑9 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgttt < 1:2789405‑M1/50‑43 (MQ=255) atatACCAtgccatataacggccctgtacgcctggacggataaagcgttt < 1:8027499‑M1/50‑43 (MQ=255) tataCCAttccatataacggccctgtacgcctggacggataaagcgttta > 1:2502030‑M1/1‑7 (MQ=255) tataCCAttccatataacggccctgtacgcctggacggataaagcgttta < 1:7867843‑M1/50‑44 (MQ=255) ataCCAttccatataacggccctgtacgcctggacggataaagcgtttac > 1:7495760‑M1/1‑6 (MQ=255) taCCAttccatataacggccctgtacgcctggacggataaagcgtttacg > 1:5429825‑M1/1‑5 (MQ=255) taCCAttccatataacggccctgtacgcctggacggataaagcgtttacg < 1:6805476‑M1/50‑46 (MQ=255) aCCAttccatataacggccctgtacgcctggacggataaagcgtttacgc > 1:3170195‑M1/1‑4 (MQ=255) aCCAttccatataacggccctgtacgcctggacggataaagcgtttacgc > 1:1052160‑M1/1‑4 (MQ=255) ccAttccatataacggccctgtacgcctggacggataaagcgtttacgc < 1:6321077‑M1/49‑47 (MQ=255) cAttccatataacggccctgtacgcctggacggataaagcgtttacgcga < 1:7935855‑M1/50‑49 (MQ=255) cAttccatataacggccctgtacgcctggacggataaagcgtttacgcga > 1:1639662‑M1/1‑2 (MQ=255) | ATAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAATGGCGCGTTCCAAAACTGCTCAGCCAAAACACTCACTGCGTAAAATC > NC_000913/167434‑167531 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |