| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,720,634 | Δ1,442 bp | IS150‑mediated | insJ–insK | insJ, insK |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3720634 | 3722075 | 1442 | 145 [0] | [0] 142 | insJ–insK | insJ,insK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3720633 | 0 (0.000) | 141 (1.300) | 65/98 | 0.0 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 3722076 = | 0 (0.000) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta | |||||
Only 100 of 145 total aligned reads displayed.
CTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT > NC_000913/3720584‑3720681 | cTATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt > 1:8263686/1‑49 (MQ=255) tataTTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaa > 1:3347162‑M1/1‑48 (MQ=255) tataTTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaa > 1:3772080‑M1/1‑48 (MQ=255) tataTTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaa > 1:1917461‑M1/1‑48 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt < 1:8033979/46‑1 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaact > 1:2398184‑M1/1‑46 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaact < 1:1761994‑M1/50‑5 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaa < 1:3336421‑M1/48‑3 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATa < 1:167421‑M1/47‑2 (MQ=255) atTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactt > 1:1558500‑M1/1‑45 (MQ=255) atTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactt > 1:7517250‑M1/1‑45 (MQ=255) tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt > 1:3961924‑M1/1‑44 (MQ=255) tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt > 1:718581‑M1/1‑44 (MQ=255) tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt < 1:349414‑M1/50‑7 (MQ=255) tCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttg < 1:1310560‑M1/49‑8 (MQ=255) gcgcaTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatt > 1:4806146‑M1/3‑39 (MQ=255) cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta > 1:7416890‑M1/2‑38 (MQ=255) cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta > 1:551904‑M1/2‑38 (MQ=255) cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattt < 1:140933‑M1/48‑12 (MQ=255) cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattt < 1:6722479‑M1/48‑12 (MQ=255) cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattt < 1:3083551‑M1/48‑12 (MQ=255) gCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttat < 1:4040032‑M1/50‑14 (MQ=255) gCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttat < 1:7530856‑M1/50‑14 (MQ=255) cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttata < 1:645702‑M1/50‑15 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatag < 1:6391132‑M1/50‑16 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatag > 1:5709066‑M1/1‑35 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatag > 1:4146696‑M1/1‑35 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatag > 1:7751913‑M1/1‑35 (MQ=255) ttCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt < 1:3842580‑M1/50‑17 (MQ=255) ttCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt < 1:1530891‑M1/50‑17 (MQ=255) tCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt > 1:2168804‑M1/1‑33 (MQ=255) tCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt > 1:7933234‑M1/1‑33 (MQ=255) cccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt > 1:7867966‑M1/1‑32 (MQ=255) ccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcag < 1:2037741‑M1/50‑20 (MQ=255) ccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcag < 1:4468668‑M1/50‑20 (MQ=255) ccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtca < 1:1297304‑M1/49‑19 (MQ=255) cAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcagg > 1:6897381‑M1/1‑30 (MQ=255) cAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcagg < 1:5295842‑M1/50‑21 (MQ=255) cAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcagg < 1:7469717‑M1/50‑21 (MQ=255) cAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcagg > 1:903024‑M1/1‑30 (MQ=255) cAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcagg < 1:4711226‑M1/50‑21 (MQ=255) cAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcagg > 1:4562580‑M1/1‑30 (MQ=255) cAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcagg > 1:3818451‑M1/1‑30 (MQ=255) aGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggt > 1:4178280‑M1/1‑29 (MQ=255) aGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggt < 1:5905026‑M1/50‑22 (MQ=255) aGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggt < 1:5314475‑M1/50‑22 (MQ=255) cctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtgg > 1:7632502‑M1/1‑27 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg < 1:1950459‑M1/50‑25 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg > 1:6579385‑M1/1‑26 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg > 1:4403507‑M1/1‑26 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg > 1:2486846‑M1/1‑26 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg < 1:6228018‑M1/50‑25 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg < 1:673862‑M1/50‑25 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg < 1:5654823‑M1/50‑25 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg < 1:4675908‑M1/50‑25 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggct > 1:3760958‑M1/1‑23 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggct > 1:1660913‑M1/1‑23 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggct < 1:7183859‑M1/50‑28 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggct > 1:7388507‑M1/1‑23 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggc < 1:7060369‑M1/49‑27 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtgggg < 1:7471975‑M1/48‑26 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtgggg < 1:7557918‑M1/48‑26 (MQ=255) tgtgTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggctt > 1:5649269‑M1/1‑22 (MQ=255) gtgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttt > 1:1469538‑M1/1‑21 (MQ=255) tgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggctt < 1:3440557‑M1/48‑29 (MQ=255) gtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttc > 1:4608347‑M1/1‑19 (MQ=255) ttGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttct > 1:6350960‑M1/1‑18 (MQ=255) ttGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttct > 1:3394488‑M1/1‑18 (MQ=255) ttGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttc < 1:8148254‑M1/49‑32 (MQ=255) ttGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttc < 1:5088591‑M1/49‑32 (MQ=255) gATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctc < 1:3706260‑M1/49‑34 (MQ=255) aTTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctctg < 1:6454533‑M1/50‑36 (MQ=255) aTTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctctg < 1:8095374‑M1/50‑36 (MQ=255) aTTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctctg < 1:5511911‑M1/50‑36 (MQ=255) tttCCAACGAGTATaactttgatttatagtcaggtggggcttttctctgt < 1:8006056‑M1/50‑37 (MQ=255) ttCCAACGAGTATaactttgatttatagtcaggtggggcttttctctgtc > 1:6038155‑M1/1‑13 (MQ=255) ccAACGAGTATaactttgatttatagtcaggtggggcttttctctgtct < 1:7684276‑M1/49‑39 (MQ=255) ccAACGAGTATaactttgatttatagtcaggtggggcttttctctgtct < 1:6012554‑M1/49‑39 (MQ=255) ccAACGAGTATaactttgatttatagtcaggtggggcttttctctgtct < 1:3088127‑M1/49‑39 (MQ=255) cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctgc > 1:1060117‑M1/1‑10 (MQ=255) cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctgc > 1:5134383‑M1/1‑10 (MQ=255) cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctgc < 1:2467151‑M1/50‑41 (MQ=255) cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctg < 1:5763346‑M1/49‑40 (MQ=255) cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctg < 1:4206594‑M1/49‑40 (MQ=255) aaCGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcc > 1:518576‑M1/1‑9 (MQ=255) aCGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcct > 1:7076086‑M1/1‑8 (MQ=255) aCGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcct < 1:2146245‑M1/50‑43 (MQ=255) aCGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcct > 1:4814005‑M1/1‑8 (MQ=255) cGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcctt > 1:5891184‑M1/1‑7 (MQ=255) gAGTATaactttgatttatagtcaggtggggcttttctctgtctgccttt < 1:3368654‑M1/50‑45 (MQ=255) gAGTATaactttgatttatagtcaggtggggcttttctctgtctgccttt > 1:7724844‑M1/1‑6 (MQ=255) gAGTATaactttgatttatagtcaggtggggcttttctctgtctgccttt > 1:6664401‑M1/1‑6 (MQ=255) gAGTATaactttgatttatagtcaggtggggcttttctctgtctgccttt < 1:6513219‑M1/50‑45 (MQ=255) gAGTATaactttgatttatagtcaggtggggcttttctctgtctgccttt < 1:4522903‑M1/50‑45 (MQ=255) aGTATaactttgatttatagtcaggtggggcttttctctgtctgcctttc < 1:7002652‑M1/50‑46 (MQ=255) gTATaactttgatttatagtcaggtggggcttttctctgtctgcctttcg > 1:5981795‑M1/1‑4 (MQ=255) tataactttgatttatagtcaggtggggcttttctctgtctgcctttcgg < 1:7384219‑M1/50‑48 (MQ=255) taactttgatttatagtcaggtggggcttttctctgtctgcctttcggt > 1:2455169‑M1/1‑1 (MQ=255) taactttgatttatagtcaggtggggcttttctctgtctgcctttcggt > 1:1650509‑M1/1‑1 (MQ=255) taactttgatttatagtcaggtggggcttttctctgtctgcctttcggt < 1:6237050‑M1/49‑49 (MQ=255) | CTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT > NC_000913/3720584‑3720681 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |