New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2066304 | NA (NA) | 120 (1.100) | 72/98 | 0.0 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor |
Only 100 of 120 total aligned reads displayed.
GGCGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGG > NC_000913/2080543‑2080639 | cagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:8154787‑M2/50‑50 (MQ=255) agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:1370583‑M2/49‑49 (MQ=255) agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:5838069‑M2/49‑49 (MQ=255) agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGc < 1:7674406‑M2/2‑1 (MQ=255) agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGc < 1:2422667‑M2/2‑1 (MQ=255) gcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:3808656‑M2/48‑48 (MQ=255) gcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCa < 1:5615885‑M2/3‑1 (MQ=255) gcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCa < 1:1397923‑M2/3‑1 (MQ=255) gcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCa < 1:1710972‑M2/3‑1 (MQ=255) gcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCa < 1:6040779‑M2/3‑1 (MQ=255) cctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:5825245‑M2/47‑47 (MQ=255) cctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:3561580‑M2/47‑47 (MQ=255) cctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAg < 1:4757728‑M2/4‑1 (MQ=255) cctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAg < 1:722677‑M2/4‑1 (MQ=255) ctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAg > 1:4517267‑M2/46‑49 (MQ=255) ctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAg > 1:7839603‑M2/46‑49 (MQ=255) tatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGa > 1:543277‑M2/45‑49 (MQ=255) atttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa > 1:6981129‑M2/44‑50 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:4058981‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:5610368‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAAc < 1:7340737‑M2/8‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAAc < 1:279384‑M2/8‑1 (MQ=255) tagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTc > 1:2185503‑M2/41‑50 (MQ=255) agaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc > 1:7527588‑M2/40‑50 (MQ=255) agaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc > 1:4465654‑M2/40‑50 (MQ=255) agaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTc < 1:2355781‑M2/10‑1 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCg > 1:5961846‑M2/39‑50 (MQ=255) accgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCg > 1:3295286‑M2/38‑49 (MQ=255) accgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGt < 1:885283‑M2/13‑1 (MQ=255) accgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGt < 1:4285484‑M2/13‑1 (MQ=255) ccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGt > 1:5176797‑M2/37‑49 (MQ=255) ccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGt > 1:903195‑M2/37‑49 (MQ=255) cgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTaa < 1:2232199‑M2/15‑1 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:2379554‑M2/35‑50 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCACAAACTCCGTAAt < 1:2173966‑M2/16‑1 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:7061257‑M2/31‑46 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:4235155‑M2/31‑46 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:3575983‑M2/31‑46 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:3187300‑M2/31‑46 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATgag < 1:1484855‑M2/19‑1 (MQ=255) ttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt > 1:1719393‑M2/30‑50 (MQ=255) tcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt > 1:8185172‑M2/29‑49 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATgaga < 1:4089756‑M2/20‑1 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAtt > 1:3927493‑M2/28‑49 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAtt < 1:6540441‑M2/22‑1 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAtt < 1:603946‑M2/22‑1 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt < 1:7361349‑M2/21‑1 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt < 1:108056‑M2/21‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTa < 1:4668001‑M2/23‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTa < 1:7710042‑M2/23‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTa > 1:4454793‑M2/27‑49 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTa < 1:5398352‑M2/23‑1 (MQ=255) ccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaa < 1:3552961‑M2/25‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaaa < 1:6493521‑M2/26‑1 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc < 1:1428745‑M2/28‑1 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc < 1:7138314‑M2/28‑1 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc < 1:4911353‑M2/28‑1 (MQ=255) ttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcg > 1:6162834‑M2/22‑50 (MQ=255) taaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcgc > 1:7194291‑M2/21‑50 (MQ=255) taaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcg < 1:585221‑M2/29‑1 (MQ=255) aaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcgc < 1:7494629‑M2/30‑1 (MQ=255) aaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt > 1:6395195‑M2/20‑50 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt > 1:1220978‑M2/19‑49 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt < 1:2521856‑M2/31‑1 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt < 1:7879134‑M2/31‑1 (MQ=255) gcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCa > 1:259794‑M2/17‑49 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa > 1:3487430‑M2/15‑50 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa < 1:4912024‑M2/36‑1 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa < 1:7303212‑M2/36‑1 (MQ=255) ttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAc > 1:5260274‑M2/14‑50 (MQ=255) tatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt > 1:3874332‑M2/13‑50 (MQ=255) atccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt > 1:6904289‑M2/12‑49 (MQ=255) atccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt > 1:3643643‑M2/12‑49 (MQ=255) atccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt < 1:7150272‑M2/38‑1 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCa < 1:6635100‑M2/40‑1 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCa > 1:1980202‑M2/11‑50 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCa > 1:7909229‑M2/11‑50 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCa < 1:3988937‑M2/40‑1 (MQ=255) ccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCAt > 1:527307‑M2/10‑50 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATc > 1:1706376‑M2/9‑50 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATc < 1:2505169‑M2/42‑1 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATc > 1:4754245‑M2/9‑50 (MQ=255) ccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCt < 1:6487596‑M2/43‑1 (MQ=255) ccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCt < 1:416186‑M2/43‑1 (MQ=255) ccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCt < 1:7054026‑M2/43‑1 (MQ=255) ccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCt > 1:3113453‑M2/8‑50 (MQ=255) cagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTg > 1:909939‑M2/7‑50 (MQ=255) cagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTg > 1:4929239‑M2/7‑50 (MQ=255) cagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTg > 1:4441809‑M2/7‑50 (MQ=255) agtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGt > 1:2978094‑M2/6‑50 (MQ=255) agtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGt > 1:1302705‑M2/6‑50 (MQ=255) agtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGt > 1:1027098‑M2/6‑50 (MQ=255) gtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc > 1:7573611‑M2/5‑50 (MQ=255) tttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCg > 1:6988044‑M2/4‑50 (MQ=255) tttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCg > 1:6974736‑M2/4‑50 (MQ=255) tttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCg > 1:2309333‑M2/4‑50 (MQ=255) tttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCg < 1:1665265‑M2/47‑1 (MQ=255) tttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCg < 1:1098230‑M2/47‑1 (MQ=255) ttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCgg > 1:1062711‑M2/3‑50 (MQ=255) tGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCgg < 1:2308912‑M2/48‑1 (MQ=255) | GGCGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGG > NC_000913/2080543‑2080639 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |