| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2558699 | 2565488 | 6790 | 90 [0] | [0] 84 | intZ–[eutA] | intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2558698 | 0 (0.000) | 77 (0.850) | 51/82 | 0.0 | 100% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/CPZ‑55 prophage; putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 0 (0.000) | coding (1396/1404 nt) | eutA | reactivating factor for ethanolamine ammonia‑lyase EutBC | |||||
CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCG > NC_000913/2558649‑2558747 | cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG < 1:4289535‑M1/50‑1 (MQ=255)cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:5730042‑M1/1‑50 (MQ=255)cATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG < 1:4905965‑M1/50‑1 (MQ=255) aTTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGg < 1:2241856‑M1/50‑2 (MQ=255) aTTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGg < 1:5492047‑M1/50‑2 (MQ=255) aTTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:3013436‑M1/1‑49 (MQ=255) aTTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:8127742‑M1/1‑49 (MQ=255) aTTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:5097333‑M1/1‑49 (MQ=255) ttGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGg > 1:4144296‑M1/1‑48 (MQ=255) ccGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaat > 1:5339907‑M1/1‑45 (MQ=255) ccGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaa < 1:840167‑M1/49‑5 (MQ=255) ccGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaa < 1:1180276‑M1/49‑5 (MQ=255) cGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatg > 1:6162721‑M1/1‑44 (MQ=255) cGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatg < 1:3988557‑M1/50‑7 (MQ=255) cGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatg < 1:1171609‑M1/50‑7 (MQ=255) gAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgc > 1:977655‑M1/1‑43 (MQ=255) gAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgc > 1:3095663‑M1/1‑43 (MQ=255) aaCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgc > 1:4973013‑M1/1‑42 (MQ=255) aCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcga < 1:79006‑M1/50‑10 (MQ=255) aCAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgc > 1:4127778‑M1/1‑41 (MQ=255) cAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgag < 1:2755701‑M1/50‑11 (MQ=255) cAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgag > 1:7924052‑M1/1‑40 (MQ=255) aaTGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagt > 1:8043770‑M1/1‑39 (MQ=255) aaTGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagt < 1:3906348‑M1/50‑12 (MQ=255) tgtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtga > 1:6668536‑M1/1‑37 (MQ=255) gtgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgat > 1:5007202‑M1/1‑36 (MQ=255) tgGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgat < 1:1660347‑M1/49‑15 (MQ=255) ggTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgattt > 1:7424777‑M1/1‑34 (MQ=255) gTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttc < 1:4714310‑M1/50‑18 (MQ=255) gTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttc < 1:3506336‑M1/50‑18 (MQ=255) gTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgattt < 1:8251394‑M1/49‑17 (MQ=255) tCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttca > 1:287114‑M1/1‑32 (MQ=255) tCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttca < 1:5484736‑M1/50‑19 (MQ=255) tCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttca > 1:4655156‑M1/1‑32 (MQ=255) tCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgaatgatttca > 1:1571917‑M1/1‑32 (MQ=255) cTTTAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcac > 1:7891097‑M1/1‑31 (MQ=255) tttAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcacc > 1:390893‑M1/1‑30 (MQ=255) tttAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcacc > 1:3789710‑M1/1‑30 (MQ=255) tAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgt > 1:130749‑M1/1‑28 (MQ=255) tAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccg < 1:3117554‑M1/49‑22 (MQ=255) tAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcacc < 1:7365430‑M1/48‑21 (MQ=255) tAGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcacc < 1:4393011‑M1/48‑21 (MQ=255) aGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgt < 1:4609347‑M1/49‑23 (MQ=255) aGTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgt < 1:2212678‑M1/49‑23 (MQ=255) gTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtc < 1:7437792‑M1/49‑24 (MQ=255) gTTTCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtc < 1:6864009‑M1/49‑24 (MQ=255) tttCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcac > 1:5875467‑M1/1‑25 (MQ=255) ttCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcacc > 1:4261479‑M1/1‑24 (MQ=255) ttCATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcacc > 1:7833198‑M1/1‑24 (MQ=255) cATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccgg > 1:1512941‑M1/1‑22 (MQ=255) cATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccgg > 1:6949760‑M1/1‑22 (MQ=255) cATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccgg > 1:6582022‑M1/1‑22 (MQ=255) cATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccgg > 1:32268‑M1/1‑22 (MQ=255) cATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccg < 1:7059394‑M1/49‑28 (MQ=255) cATAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccg < 1:1629066‑M1/49‑28 (MQ=255) aTAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggc < 1:4156849‑M1/50‑30 (MQ=255) aTAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggc < 1:4763923‑M1/50‑30 (MQ=255) aTAAGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccgg > 1:6315331‑M1/1‑21 (MQ=255) aaGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggca > 1:5724307‑M1/1‑19 (MQ=255) aaGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggca > 1:4945950‑M1/1‑19 (MQ=255) aGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcaca < 1:844077‑M1/50‑33 (MQ=255) aGTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcac > 1:6468377‑M1/1‑18 (MQ=255) gTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaa < 1:2707048‑M1/50‑34 (MQ=255) gTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaa > 1:4730399‑M1/1‑17 (MQ=255) gTCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaa > 1:5613396‑M1/1‑17 (MQ=255) tCGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaac > 1:5312028‑M1/1‑16 (MQ=255) cGTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacc > 1:3400684‑M1/1‑15 (MQ=255) gTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacc > 1:7176304‑M1/1‑14 (MQ=255) gTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacc < 1:2845379‑M1/49‑36 (MQ=255) gTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacc > 1:17719‑M1/1‑14 (MQ=255) gTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacc < 1:7556227‑M1/49‑36 (MQ=255) gTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacc < 1:1475030‑M1/49‑36 (MQ=255) gTTCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaacc > 1:5995026‑M1/1‑14 (MQ=255) ttCCCTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcgcaaccga < 1:1288473‑M1/50‑38 (MQ=255) cccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgat < 1:7118872‑M1/49‑39 (MQ=255) ccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatcc < 1:7057021‑M1/50‑41 (MQ=255) ccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatcc > 1:7459965‑M1/1‑10 (MQ=255) ccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatcc < 1:1567132‑M1/50‑41 (MQ=255) ccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatcc > 1:2455903‑M1/1‑10 (MQ=255) ccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatc < 1:3892603‑M1/49‑40 (MQ=255) ccTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatc < 1:4849109‑M1/49‑40 (MQ=255) cTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccg < 1:1527877‑M1/50‑42 (MQ=255) cTCAGGAAGgaaatgcgagtgatttcaccgtcaccggcacaaccgatccg > 1:3405875‑M1/1‑9 (MQ=255) aggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgcc > 1:3182906‑M1/1‑6 (MQ=255) aggaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgc < 1:4042549‑M1/48‑43 (MQ=255) gaaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaa > 1:1189779‑M1/1‑4 (MQ=255) aaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaa > 1:2893070‑M1/1‑3 (MQ=255) aaggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaa > 1:2976244‑M1/1‑3 (MQ=255) aggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaa > 1:6916583‑M1/1‑2 (MQ=255) ggaaatgcgagtgatttcaccgtcaccggcacaaccgatccgccaaaaag < 1:2095915‑M1/50‑50 (MQ=255) | CATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGAATCGATGATTGGCATTTTTCACAGCATTCTAACAATCACGTTTCATCG > NC_000913/2558649‑2558747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |