BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,581,139	3915 bp→CAAATG		[yhhY]–yrhB	[yhhY], yhhZ, yrhA, insA‑6, insB‑6, yrhA, yrhD, yrhB

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3581139	3585053	3915	118 [0]	[0] 112	[yhhY]–yrhB	[yhhY],yhhZ,yrhA,insA‑6,insB‑6,yrhA,yrhD,yrhB

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3581138	0 (0.000)	106 (1.110) +CAAATG	54/86	0.0	100%	coding (1/489 nt)	yhhY	N‑acetyltransferase YhhY
*	?	NC_000913	3585054 =	0 (0.000)	106 (1.110) +CAAATG	54/86	0.0	100%	intergenic (+11/+27)	yrhB/ggt	putative heat shock chaperone/glutathione hydrolase proenzyme

Only 100 of 112 total aligned reads displayed.

ATTACGAAATAAAAAAGGCTACCTTCGGCTTGCCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCAT  >  NC_000913/3585006‑3585103

atgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgct                                                  >  1:8187821‑M2/49‑50 (MQ=255)

 tgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgctc                                                 <  1:7841426‑M2/3‑1 (MQ=255)

  gatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgctct                                                >  1:3886757‑M2/47‑50 (MQ=255)

  gatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgctct                                                >  1:6022865‑M2/47‑50 (MQ=255)

   atgttgaaagggacatttaccccaaagaggacaaaggaacaaatgctct                                                <  1:6532609‑M2/4‑1 (MQ=255)

   atgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCtt                                               <  1:206346‑M2/5‑1 (MQ=255)

   atgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCtt                                               <  1:1318151‑M2/5‑1 (MQ=255)

   atgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCtt                                               <  1:8072130‑M2/5‑1 (MQ=255)

   atgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCtt                                               <  1:1728296‑M2/5‑1 (MQ=255)

    tgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTc                                              <  1:3446549‑M2/6‑1 (MQ=255)

    tgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTc                                              <  1:2019281‑M2/6‑1 (MQ=255)

    tgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTc                                              <  1:5664963‑M2/6‑1 (MQ=255)

     gttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc                                             >  1:7091866‑M2/44‑50 (MQ=255)

     gttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc                                             >  1:649626‑M2/44‑50 (MQ=255)

      ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc                                             <  1:3640685‑M2/7‑1 (MQ=255)

      ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc                                             <  1:1417930‑M2/7‑1 (MQ=255)

       tgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCa                                           >  1:825548‑M2/42‑50 (MQ=255)

        gaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCa                                           <  1:7332270‑M2/9‑1 (MQ=255)

        gaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCAc                                          >  1:2292557‑M2/41‑50 (MQ=255)

        gaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCAc                                          >  1:1843316‑M2/41‑50 (MQ=255)

         aaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCAc                                          <  1:8242646‑M2/10‑1 (MQ=255)

         aaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACg                                         <  1:1922099‑M2/11‑1 (MQ=255)

         aaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACg                                         <  1:7922412‑M2/11‑1 (MQ=255)

         aaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACg                                         <  1:6037641‑M2/11‑1 (MQ=255)

          aagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACg                                         >  1:2783620‑M2/39‑49 (MQ=255)

           agggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACg                                         >  1:2969142‑M2/38‑48 (MQ=255)

           agggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACg                                         >  1:1394075‑M2/38‑48 (MQ=255)

            gggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACg                                         >  1:5217757‑M2/37‑47 (MQ=255)

            gggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAag                                      <  1:549262‑M2/14‑1 (MQ=255)

             ggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGaa                                       >  1:1071756‑M2/36‑48 (MQ=255)

             ggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAaga                                     <  1:1423584‑M2/15‑1 (MQ=255)

              gacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAagag                                    <  1:5557638‑M2/16‑1 (MQ=255)

              gacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAagag                                    <  1:6396386‑M2/16‑1 (MQ=255)

               acatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAgg                                   <  1:2809282‑M2/17‑1 (MQ=255)

               acatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAgg                                   >  1:2861595‑M2/34‑50 (MQ=255)

               acatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAgg                                   <  1:202057‑M2/17‑1 (MQ=255)

               acatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAgg                                   <  1:8234360‑M2/17‑1 (MQ=255)

               acatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAgg                                   >  1:6489882‑M2/34‑50 (MQ=255)

                catttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAggg                                  <  1:481699‑M2/18‑1 (MQ=255)

                catttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAggg                                  <  1:1916658‑M2/18‑1 (MQ=255)

                catttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAggg                                  <  1:8235395‑M2/18‑1 (MQ=255)

                 atttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGc                                 >  1:1017018‑M2/32‑50 (MQ=255)

                  tttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGcc                                >  1:6327006‑M2/31‑50 (MQ=255)

                  tttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGcc                                >  1:3707368‑M2/31‑50 (MQ=255)

                  tttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGcc                                <  1:2358064‑M2/20‑1 (MQ=255)

                  tttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGcc                                >  1:5119697‑M2/31‑50 (MQ=255)

                   ttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCg                               >  1:3886410‑M2/30‑50 (MQ=255)

                   ttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCg                               >  1:5556128‑M2/30‑50 (MQ=255)

                    taccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCg                               <  1:7860531‑M2/21‑1 (MQ=255)

                    taccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGc                              >  1:2956203‑M2/29‑50 (MQ=255)

                    taccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGc                              >  1:29126‑M2/29‑50 (MQ=255)

                    taccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGc                              >  1:1011693‑M2/29‑50 (MQ=255)

                     accccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGc                              >  1:869962‑M2/28‑49 (MQ=255)

                     accccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGc                              >  1:1197431‑M2/28‑49 (MQ=255)

                      ccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCt                             >  1:6986696‑M2/27‑49 (MQ=255)

                      ccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCt                             >  1:1537777‑M2/27‑49 (MQ=255)

                      ccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCt                             <  1:4011758‑M2/23‑1 (MQ=255)

                       cccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTaa                           <  1:2526186‑M2/25‑1 (MQ=255)

                       cccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTaa                           >  1:7388548‑M2/26‑50 (MQ=255)

                       cccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTaa                           >  1:3132212‑M2/26‑50 (MQ=255)

                         caaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAAcc                         >  1:6947819‑M2/24‑50 (MQ=255)

                          aaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                        <  1:5147379‑M2/28‑1 (MQ=255)

                          aaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                        >  1:492081‑M2/23‑50 (MQ=255)

                          aaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                        >  1:2712975‑M2/23‑50 (MQ=255)

                          aaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                        >  1:7109618‑M2/23‑50 (MQ=255)

                          aaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                        >  1:3014452‑M2/23‑50 (MQ=255)

                          aaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                        >  1:3483267‑M2/23‑50 (MQ=255)

                          aaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                        >  1:4302186‑M2/23‑50 (MQ=255)

                          aaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                        >  1:5174741‑M2/23‑50 (MQ=255)

                           aagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                        >  1:8281309‑M2/22‑49 (MQ=255)

                            agaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                        >  1:4052889‑M2/21‑48 (MQ=255)

                            agaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTa                      <  1:8218601‑M2/30‑1 (MQ=255)

                            agaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTa                      <  1:7958002‑M2/30‑1 (MQ=255)

                            agaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTa                      <  1:2144296‑M2/30‑1 (MQ=255)

                             gaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAg                     >  1:858856‑M2/20‑50 (MQ=255)

                             gaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAg                     >  1:1307407‑M2/20‑50 (MQ=255)

                              aggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAg                     >  1:3888643‑M2/19‑49 (MQ=255)

                              aggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAg                     >  1:7773400‑M2/19‑49 (MQ=255)

                              aggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGt                    <  1:4055530‑M2/32‑1 (MQ=255)

                              aggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGt                    <  1:5883381‑M2/32‑1 (MQ=255)

                               ggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTa                   <  1:6081929‑M2/33‑1 (MQ=255)

                               ggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTa                   >  1:7163856‑M2/18‑50 (MQ=255)

                               ggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTa                   <  1:7375170‑M2/33‑1 (MQ=255)

                               ggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTa                   >  1:1776245‑M2/18‑50 (MQ=255)

                                 acaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcc                 >  1:5041383‑M2/16‑50 (MQ=255)

                                 acaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcc                 <  1:2455867‑M2/35‑1 (MQ=255)

                                 acaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcc                 >  1:4001927‑M2/16‑50 (MQ=255)

                                 acaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcc                 <  1:4957554‑M2/35‑1 (MQ=255)

                                  caaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAccc                >  1:3622498‑M2/15‑50 (MQ=255)

                                    aaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccg              <  1:3576747‑M2/38‑1 (MQ=255)

                                     aggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgc             >  1:4239910‑M2/12‑50 (MQ=255)

                                     aggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgc             >  1:1646833‑M2/12‑50 (MQ=255)

                                       gaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgccg           <  1:6032138‑M2/41‑1 (MQ=255)

                                         acaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGt          >  1:3998295‑M2/8‑49 (MQ=255)

                                          caaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGtt         >  1:1530833‑M2/7‑49 (MQ=255)

                                           aaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTa        >  1:4898001‑M2/6‑49 (MQ=255)

                                           aaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTa        >  1:7610422‑M2/6‑49 (MQ=255)

                                           aaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTa        >  1:2964008‑M2/6‑49 (MQ=255)

                                            aatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTaaa      >  1:708402‑M2/5‑50 (MQ=255)

                                                ctctTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAatcat  >  1:2096438/1‑50 (MQ=255)

ATTACGAAATAAAAAAGGCTACCTTCGGCTTGCCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCAT  >  NC_000913/3585006‑3585103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`