| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,286,401 | Δ3,780 bp | [yejO]–[yejO] | [yejO], insH‑8, [yejO] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2286401 | 2290180 | 3780 | 192 [0] | [0] 193 | [yejO]–[yejO] | [yejO],insH‑8,[yejO] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2286400 | 0 (0.000) | 191 (1.770) | 81/98 | 0.0 | 100% | pseudogene (2515/2525 nt) | yejO | adhesin‑like autotransporter YejO |
| ? | NC_000913 | 2290181 = | 0 (0.000) | intergenic (‑1/‑319) | yejO/narP | adhesin‑like autotransporter YejO/DNA‑binding transcriptional dual regulator NarP | |||||
Only 100 of 192 total aligned reads displayed.
ACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATT > NC_000913/2286351‑2286449 | cAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCt < 1:8213896‑M1/50‑2 (MQ=255) cAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCt > 1:378558‑M1/1‑49 (MQ=255) cAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCt < 1:762364‑M1/50‑2 (MQ=255) cAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCt > 1:2073074‑M1/1‑49 (MQ=255) aGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtg < 1:4663246‑M1/50‑3 (MQ=255) aGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCt > 1:4900768‑M1/1‑48 (MQ=255) aGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCt > 1:1449881‑M1/1‑48 (MQ=255) aGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCt > 1:7160536‑M1/1‑48 (MQ=255) gACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtga < 1:442329‑M1/50‑4 (MQ=255) aCCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgag > 1:1174069‑M1/1‑46 (MQ=255) aCCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgag > 1:2056179‑M1/1‑46 (MQ=255) ccGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagc < 1:4757734‑M1/50‑6 (MQ=255) ccGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagc > 1:2689682‑M1/1‑45 (MQ=255) gTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctt > 1:3936460‑M1/1‑43 (MQ=255) gTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctt < 1:1507882‑M1/50‑8 (MQ=255) gTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctt > 1:2905983‑M1/1‑43 (MQ=255) tGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagcttt > 1:4526850‑M1/1‑42 (MQ=255) gACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagcttt > 1:5362703‑M1/1‑41 (MQ=255) gACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagcttt > 1:7983829‑M1/1‑41 (MQ=255) acacATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttca < 1:6201713‑M1/50‑11 (MQ=255) acacATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttca < 1:3041555‑M1/50‑11 (MQ=255) acacATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttca < 1:1057734‑M1/50‑11 (MQ=255) acacATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttca < 1:1541500‑M1/50‑11 (MQ=255) acacATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttca > 1:7715130‑M1/1‑40 (MQ=255) cacaTCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcat < 1:6396359‑M1/50‑12 (MQ=255) cacaTCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcat > 1:7522302‑M1/1‑39 (MQ=255) cacaTCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcat < 1:3885461‑M1/50‑12 (MQ=255) aTCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcatcct < 1:5961450‑M1/50‑15 (MQ=255) aTCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcatcc > 1:5579698‑M1/1‑36 (MQ=255) tCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcatccta > 1:6840160‑M1/1‑35 (MQ=255) cacaGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcatcctat > 1:6319524‑M1/1‑34 (MQ=255) acaGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcatcctatg < 1:656603‑M1/50‑18 (MQ=255) acaGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcatcctatg < 1:7127869‑M1/50‑18 (MQ=255) acaGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcatcctat < 1:5190639‑M1/49‑17 (MQ=255) acaGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcatcctat > 1:4462559‑M1/1‑33 (MQ=255) caGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcatcctatga < 1:1373539‑M1/50‑19 (MQ=255) atcctgTTTATTTTCTGTTATCAGAACGTCCtgagctttcatcctatga > 1:7847388‑M1/3‑31 (MQ=255) aGCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcatcctatgaa < 1:5641303‑M1/50‑20 (MQ=255) gCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcatcctatgaaa < 1:5485736‑M1/50‑21 (MQ=255) gCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcatcctatgaaa > 1:6980841‑M1/1‑30 (MQ=255) gCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcatcctatgaaa > 1:5110542‑M1/1‑30 (MQ=255) gCCTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcatcctatgaaa > 1:166597‑M1/1‑30 (MQ=255) ccTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcatcctatgaaat > 1:3816236‑M1/1‑29 (MQ=255) cTGTTTATTTTCTGTTATCAGAACGTCCtgagctttcatcctatgaaat > 1:4181125‑M1/1‑28 (MQ=255) tttATTTTCTGTTATCAGAACGTCCtgagctttcatcctatgaaattaat > 1:6061932‑M1/1‑25 (MQ=255) tttATTTTCTGTTATCAGAACGTCCtgagctttcatcctatgaaattaat < 1:5095980‑M1/50‑26 (MQ=255) tttATTTTCTGTTATCAGAACGTCCtgagctttcatcctatgaaattaat < 1:3008136‑M1/50‑26 (MQ=255) tttATTTTCTGTTATCAGAACGTCCtgagctttcatcctatgaaattaa < 1:5089270‑M1/49‑25 (MQ=255) ttATTTTCTGTTATCAGAACGTCCtgagctttcatcctatgaaattaatt > 1:6884506‑M1/1‑24 (MQ=255) ttATTTTCTGTTATCAGAACGTCCtgagctttcatcctatgaaattaatt > 1:7149108‑M1/1‑24 (MQ=255) tATTTTCTGTTATCAGAACGTCCtgagctttcatcctatgaaattaattg > 1:7357692‑M1/1‑23 (MQ=255) tATTTTCTGTTATCAGAACGTCCtgagctttcatcctatgaaattaattg > 1:4714105‑M1/1‑23 (MQ=255) tATTTTCTGTTATCAGAACGTCCtgagctttcatcctatgaaattaattg > 1:1012916‑M1/1‑23 (MQ=255) tATTTTCTGTTATCAGAACGTCCtgagctttcatcctatgaaattaatt < 1:3446568‑M1/49‑27 (MQ=255) ttCTGTTATCAGAACGTCCtgagctttcatcctatgaaattaattgctgt > 1:5462033‑M1/1‑19 (MQ=255) ttCTGTTATCAGAACGTCCtgagctttcatcctatgaaattaattgctg < 1:2580942‑M1/49‑31 (MQ=255) tCTGTTATCAGAACGTCCtgagctttcatcctatgaaattaattgctgt > 1:6868519‑M1/1‑18 (MQ=255) tCTGTTATCAGAACGTCCtgagctttcatcctatgaaattaattgctgt < 1:640324‑M1/49‑32 (MQ=255) tCTGTTATCAGAACGTCCtgagctttcatcctatgaaattaattgctgt > 1:3215584‑M1/1‑18 (MQ=255) cTGTTATCAGAACGTCCtgagctttcatcctatgaaattaattgctgtt > 1:5090450‑M1/1‑17 (MQ=255) cTGTTATCAGAACGTCCtgagctttcatcctatgaaattaattgctgtt < 1:7878285‑M1/49‑33 (MQ=255) cTGTTATCAGAACGTCCtgagctttcatcctatgaaattaattgctgtt > 1:7257932‑M1/1‑17 (MQ=255) gTTATCAGAACGTCCtgagctttcatcctatgaaattaattgctgttaa > 1:6286582‑M1/1‑15 (MQ=255) ttATCAGAACGTCCtgagctttcatcctatgaaattaattgctgttaaaa < 1:5259723‑M1/50‑37 (MQ=255) ttATCAGAACGTCCtgagctttcatcctatgaaattaattgctgttaa > 1:6836887‑M1/1‑14 (MQ=255) tATCAGAACGTCCtgagctttcatcctatgaaattaattgctgttaaaag > 1:2485665‑M1/1‑13 (MQ=255) tATCAGAACGTCCtgagctttcatcctatgaaattaattgctgttaaaag > 1:3742888‑M1/1‑13 (MQ=255) tATCAGAACGTCCtgagctttcatcctatgaaattaattgctgttaaaag > 1:4325532‑M1/1‑13 (MQ=255) aTCAGAACGTCCtgagctttcatcctatgaaattaattgctgttaaaag < 1:4432519‑M1/49‑38 (MQ=255) tCAGAACGTCCtgagctttcatcctatgaaattaattgctgttaaaagca < 1:6004897‑M1/50‑40 (MQ=255) tCAGAACGTCCtgagctttcatcctatgaaattaattgctgttaaaagc < 1:7610496‑M1/49‑39 (MQ=255) cAGAACGTCCtgagctttcatcctatgaaattaattgctgttaaaagcat > 1:8041037‑M1/1‑10 (MQ=255) aGAACGTCCtgagctttcatcctatgaaattaattgctgttaaaagcatt < 1:2175059‑M1/50‑42 (MQ=255) aGAACGTCCtgagctttcatcctatgaaattaattgctgttaaaagcat < 1:706038‑M1/49‑41 (MQ=255) gAACGTCCtgagctttcatcctatgaaattaattgctgttaaaagcattg > 1:5859634‑M1/1‑8 (MQ=255) gAACGTCCtgagctttcatcctatgaaattaattgctgttaaaagcattg < 1:4242569‑M1/50‑43 (MQ=255) aaCGTCCtgagctttcatcctatgaaattaattgctgttaaaagcattgg < 1:3548643‑M1/50‑44 (MQ=255) aaCGTCCtgagctttcatcctatgaaattaattgctgttaaaagcattgg < 1:4164925‑M1/50‑44 (MQ=255) aaCGTCCtgagctttcatcctatgaaattaattgctgttaaaagcattgg < 1:860502‑M1/50‑44 (MQ=255) aCGTCCtgagctttcatcctatgaaattaattgctgttaaaagcattggg < 1:163489‑M1/50‑45 (MQ=255) aCGTCCtgagctttcatcctatgaaattaattgctgttaaaagcattggg < 1:2676920‑M1/50‑45 (MQ=255) aCGTCCtgagctttcatcctatgaaattaattgctgttaaaagcattggg < 1:903357‑M1/50‑45 (MQ=255) cGTCCtgagctttcatcctatgaaattaattgctgttaaaagcattggg > 1:2383438‑M1/1‑5 (MQ=255) gTCCtgagctttcatcctatgaaattaattgctgttaaaagcattgggta > 1:6569596‑M1/1‑4 (MQ=255) gTCCtgagctttcatcctatgaaattaattgctgttaaaagcattgggta > 1:7816687‑M1/1‑4 (MQ=255) gTCCtgagctttcatcctatgaaattaattgctgttaaaagcattgggta > 1:1922035‑M1/1‑4 (MQ=255) gTCCtgagctttcatcctatgaaattaattgctgttaaaagcattgggta < 1:8127097‑M1/50‑47 (MQ=255) gTCCtgagctttcatcctatgaaattaattgctgttaaaagcattgggta > 1:7959913‑M1/1‑4 (MQ=255) gTCCtgagctttcatcctatgaaattaattgctgttaaaagcattgggta > 1:399665‑M1/1‑4 (MQ=255) tCCtgagctttcatcctatgaaattaattgctgttaaaagcattgggtac < 1:2736523‑M1/50‑48 (MQ=255) tCCtgagctttcatcctatgaaattaattgctgttaaaagcattgggtac < 1:3065966‑M1/50‑48 (MQ=255) tCCtgagctttcatcctatgaaattaattgctgttaaaagcattgggtac < 1:4972363‑M1/50‑48 (MQ=255) tCCtgagctttcatcctatgaaattaattgctgttaaaagcattgggta > 1:5650319‑M1/1‑3 (MQ=255) tCCtgagctttcatcctatgaaattaattgctgttaaaagcattgggta > 1:1352681‑M1/1‑3 (MQ=255) cctgagctttcatcctatgaaattaattgctgttaaaagcattgggta > 1:1595198‑M1/1‑2 (MQ=255) ctgagctttcatcctatgaaattaattgctgttaaaagcattgggtacag < 1:2532614‑M1/50‑50 (MQ=255) ctgagctttcatcctatgaaattaattgctgttaaaagcattgggtaca < 1:232642‑M1/49‑49 (MQ=255) ctgagctttcatcctatgaaattaattgctgttaaaagcattgggta > 1:6181330‑M1/1‑1 (MQ=255) ctgagctttcatcctatgaaattaattgctgttaaaagcattgggta > 1:5859473‑M1/1‑1 (MQ=255) ctgagctttcatcctatgaaattaattgctgttaaaagcattgggta > 1:4421971‑M1/1‑1 (MQ=255) | ACAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCAGACCACACCCGCCTGAGTATTCCACGGCGATTCTACCCCTGCGCCATT > NC_000913/2286351‑2286449 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |