New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2066304 | NA (NA) | 161 (1.490) | 72/98 | 0.0 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor |
Only 100 of 163 total aligned reads displayed.
GGCGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080543‑2080640 | cagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:703008‑M2/50‑50 (MQ=255) cagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:1325310‑M2/50‑50 (MQ=255) cagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:4368594‑M2/50‑50 (MQ=255) agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:4184679‑M2/49‑49 (MQ=255) gcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:7345108‑M2/48‑48 (MQ=255) gcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCa < 1:4761439‑M2/3‑1 (MQ=255) gcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCa < 1:4510078‑M2/3‑1 (MQ=255) ctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAg > 1:1658458‑M2/46‑49 (MQ=255) ctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAg > 1:3457525‑M2/46‑49 (MQ=255) tatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGa > 1:265319‑M2/45‑49 (MQ=255) atttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa > 1:6599337‑M2/44‑50 (MQ=255) atttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa > 1:1495486‑M2/44‑50 (MQ=255) atttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa > 1:3794981‑M2/44‑50 (MQ=255) atttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa > 1:3843998‑M2/44‑50 (MQ=255) atttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa > 1:1962551‑M2/44‑50 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa < 1:1709449‑M2/7‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa < 1:3982950‑M2/7‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:2003333‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaa < 1:4146119‑M2/6‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAAc > 1:3717850‑M2/43‑50 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAAc < 1:992440‑M2/8‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAAc < 1:247879‑M2/8‑1 (MQ=255) ttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACt > 1:4086806‑M2/42‑50 (MQ=255) tgaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc > 1:28203‑M2/40‑50 (MQ=255) agaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc > 1:2934084‑M2/40‑50 (MQ=255) agaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc > 1:6431256‑M2/40‑50 (MQ=255) agaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTc < 1:2708945‑M2/10‑1 (MQ=255) agaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTc < 1:5904344‑M2/10‑1 (MQ=255) agaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTc < 1:2957956‑M2/10‑1 (MQ=255) accgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGt < 1:6787919‑M2/13‑1 (MQ=255) cgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTaa < 1:492338‑M2/15‑1 (MQ=255) cgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTaa < 1:4251317‑M2/15‑1 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:8310951‑M2/35‑50 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:5251956‑M2/35‑50 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:1371830‑M2/35‑50 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt < 1:1407325‑M2/16‑1 (MQ=255) gtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:1206822‑M2/35‑50 (MQ=255) tttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:5560633‑M2/34‑49 (MQ=255) tttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:1785547‑M2/34‑49 (MQ=255) tttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATg < 1:6608891‑M2/17‑1 (MQ=255) tttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATg < 1:5110243‑M2/17‑1 (MQ=255) tttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATg < 1:30361‑M2/17‑1 (MQ=255) tttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATg < 1:7831668‑M2/17‑1 (MQ=255) ttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:7116441‑M2/33‑48 (MQ=255) ttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:8021015‑M2/33‑48 (MQ=255) ttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:7763903‑M2/33‑48 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:5291515‑M2/31‑46 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:1314210‑M2/31‑46 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:7676250‑M2/31‑46 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATgag < 1:6653919‑M2/19‑1 (MQ=255) tcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt > 1:1248322‑M2/29‑49 (MQ=255) tcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt > 1:2825516‑M2/29‑49 (MQ=255) tcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt > 1:567615‑M2/29‑49 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAtt < 1:6260866‑M2/22‑1 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAtt > 1:4571379‑M2/28‑49 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt < 1:7212541‑M2/21‑1 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt < 1:8103913‑M2/21‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTa < 1:6948905‑M2/23‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTa < 1:6113332‑M2/23‑1 (MQ=255) ccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:1052557‑M2/26‑49 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaaa < 1:7388066‑M2/26‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaaa < 1:4698211‑M2/26‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaaa < 1:6678272‑M2/26‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:221445‑M2/25‑48 (MQ=255) atttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAg > 1:7162012‑M2/24‑50 (MQ=255) atttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAg < 1:1900482‑M2/27‑1 (MQ=255) atttaaggcgttatccccagtttGCAGAAACTCCGCAATGAGATTAAAAg > 1:4862319‑M2/24‑50 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc < 1:185474‑M2/28‑1 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc < 1:2913439‑M2/28‑1 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc > 1:2343613‑M2/23‑50 (MQ=255) ttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcg > 1:3486101‑M2/22‑50 (MQ=255) taaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcg < 1:4263353‑M2/29‑1 (MQ=255) aaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt > 1:6266471‑M2/20‑50 (MQ=255) aaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCt > 1:2844223‑M2/20‑50 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTc < 1:8063975‑M2/32‑1 (MQ=255) ggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCa < 1:3714361‑M2/33‑1 (MQ=255) ggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCa > 1:2306550‑M2/18‑50 (MQ=255) ggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCa < 1:2469758‑M2/33‑1 (MQ=255) gcgttatccccagtttGTAGAAACTCCGTAATGAGATTAAAAGCGCTCAt < 1:5985524‑M2/34‑1 (MQ=255) cgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATa < 1:7909605‑M2/35‑1 (MQ=255) cgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATa < 1:6890594‑M2/35‑1 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa > 1:1471102‑M2/15‑50 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa < 1:8185719‑M2/36‑1 (MQ=255) ttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAc > 1:7786660‑M2/14‑50 (MQ=255) tatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt > 1:3650806‑M2/13‑50 (MQ=255) atccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt < 1:4412143‑M2/38‑1 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTc < 1:761576‑M2/39‑1 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCa > 1:3906990‑M2/11‑50 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCa > 1:4883654‑M2/11‑50 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCAt < 1:2019990‑M2/41‑1 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCAt < 1:5693736‑M2/41‑1 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATc > 1:7530173‑M2/9‑50 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATc > 1:1065270‑M2/9‑50 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATc < 1:3024970‑M2/42‑1 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATc < 1:496653‑M2/42‑1 (MQ=255) cagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTg > 1:5827006‑M2/7‑50 (MQ=255) agtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGt < 1:2590450‑M2/45‑1 (MQ=255) gtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTc < 1:7909394‑M2/46‑1 (MQ=255) tttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCg < 1:8290814‑M2/47‑1 (MQ=255) gcaGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGc > 1:6034913/1‑49 (MQ=255) | GGCGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080543‑2080640 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |