| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,509,631 | Δ8,319 bp | [yfeO]–pdeA | [yfeO], ypeC, mntH, nupC, insL‑3, pdeA | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2509631 | 2517949 | 8319 | 82 [0] | [0] 79 | [yfeO]–pdeA | [yfeO],ypeC,mntH,nupC,insL‑3,pdeA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2509630 | 0 (0.000) | 78 (0.720) | 52/98 | 0.1 | 100% | coding (1/1257 nt) | yfeO | putative transport protein YfeO |
| ? | NC_000913 | 2517950 = | 0 (0.000) | intergenic (‑118/+91) | pdeA/alaX | putative c‑di‑GMP phosphodiesterase PdeA/tRNA‑Ala | |||||
ACAGGGGGCCAGCCTGTTGCCGATTTTTCATCCAATGATGCTTTCACCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAGC > NC_000913/2517903‑2517999 | gcaagctgggcaaactaagtatctgaccccgcataaggaatagaacaca < 1:5085906‑M2/2‑1 (MQ=255)gcaagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAg > 1:6469971‑M2/48‑50 (MQ=255) caagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAgg > 1:4968412‑M2/47‑50 (MQ=255) caagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAgg > 1:4378052‑M2/47‑50 (MQ=255) caagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAgg > 1:6812832‑M2/47‑50 (MQ=255) aagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggc < 1:4718786‑M2/5‑1 (MQ=255) aagctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggc > 1:4533653‑M2/46‑50 (MQ=255) agctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcg < 1:3857614‑M2/6‑1 (MQ=255) agctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcg < 1:6143899‑M2/6‑1 (MQ=255) agctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcg < 1:310413‑M2/6‑1 (MQ=255) gctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcgg > 1:4398902‑M2/44‑50 (MQ=255) ctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcgg > 1:5228734‑M2/43‑49 (MQ=255) ggcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCAc > 1:2082352‑M2/40‑49 (MQ=255) ggcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCAc < 1:6276424‑M2/10‑1 (MQ=255) ggcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCAc > 1:6357037‑M2/40‑49 (MQ=255) caaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTaa > 1:1738599‑M2/38‑50 (MQ=255) aaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAc < 1:238598‑M2/14‑1 (MQ=255) aaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAc > 1:5658612‑M2/37‑50 (MQ=255) aactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAcc < 1:3493402‑M2/15‑1 (MQ=255) aactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAcc > 1:2069852‑M2/36‑50 (MQ=255) aactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAcc < 1:6679854‑M2/15‑1 (MQ=255) actaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAccc < 1:6755716‑M2/16‑1 (MQ=255) actaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAccc < 1:5057303‑M2/16‑1 (MQ=255) ctaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCg > 1:294527‑M2/34‑50 (MQ=255) taagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCg > 1:684075‑M2/33‑49 (MQ=255) taagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCg > 1:8034670‑M2/33‑49 (MQ=255) aagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGa > 1:2150900‑M2/32‑50 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCgg < 1:7452168‑M2/18‑1 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGa < 1:8217012‑M2/19‑1 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGAc < 1:6835030‑M2/20‑1 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGAc > 1:7345596‑M2/31‑50 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGAc > 1:1318216‑M2/31‑50 (MQ=255) gtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACg > 1:3673587‑M2/30‑50 (MQ=255) tatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGt < 1:7598212‑M2/22‑1 (MQ=255) atctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACg > 1:5203451‑M2/28‑48 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGa < 1:3897364‑M2/25‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTg < 1:1276842‑M2/28‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTg < 1:7718595‑M2/28‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTg > 1:2446742‑M2/23‑50 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTg < 1:6289671‑M2/28‑1 (MQ=255) ccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTg > 1:5232661‑M2/22‑49 (MQ=255) ccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTg > 1:2949185‑M2/22‑49 (MQ=255) cccgcataaggattagaacaCAGGCGGCACTAACCCGGACGTAGACTGTa > 1:5237398‑M2/21‑50 (MQ=255) ccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt > 1:5014378‑M2/20‑50 (MQ=255) ccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt < 1:1425051‑M2/31‑1 (MQ=255) ccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt > 1:5655217‑M2/20‑50 (MQ=255) cgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAtt < 1:7969168‑M2/32‑1 (MQ=255) cgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAtt < 1:7342499‑M2/32‑1 (MQ=255) cataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTa > 1:6004939‑M2/17‑49 (MQ=255) cataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTa > 1:3751120‑M2/17‑49 (MQ=255) cataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTa > 1:7461423‑M2/17‑49 (MQ=255) cataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTAc < 1:589846‑M2/34‑1 (MQ=255) cataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTAc < 1:6566352‑M2/34‑1 (MQ=255) ataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTAc > 1:5897807‑M2/16‑49 (MQ=255) ataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTAc > 1:3284994‑M2/16‑49 (MQ=255) aggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaaaa < 1:6042110‑M2/38‑1 (MQ=255) aggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaaaa < 1:7725506‑M2/38‑1 (MQ=255) aggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaaaa < 1:5460993‑M2/38‑1 (MQ=255) ggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAg < 1:2373904‑M2/39‑1 (MQ=255) gaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGc < 1:1510631‑M2/40‑1 (MQ=255) aatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCg > 1:457300‑M2/10‑50 (MQ=255) atagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCgg < 1:2411187‑M2/42‑1 (MQ=255) atagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCgg < 1:7342068‑M2/42‑1 (MQ=255) atagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCgg < 1:6598478‑M2/42‑1 (MQ=255) tagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCgg > 1:6843028‑M2/8‑49 (MQ=255) tagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCgg > 1:5258950‑M2/8‑49 (MQ=255) tagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCgg > 1:7856180‑M2/8‑49 (MQ=255) tagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGc < 1:6139863‑M2/43‑1 (MQ=255) tagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGc < 1:663718‑M2/43‑1 (MQ=255) gaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCa < 1:1972160‑M2/44‑1 (MQ=255) gaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCa > 1:6350519‑M2/6‑49 (MQ=255) aacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaaa < 1:788999‑M2/46‑1 (MQ=255) acaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaaaa < 1:4454859‑M2/47‑1 (MQ=255) caCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaaaaa < 1:2829314‑M2/48‑1 (MQ=255) caCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaaa > 1:7597540‑M2/3‑48 (MQ=255) aCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAg < 1:3776210‑M2/49‑1 (MQ=255) aCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAg < 1:7807140‑M2/49‑1 (MQ=255) aCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAg > 1:1359139‑M2/2‑50 (MQ=255) cAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAGc < 1:3551037/50‑1 (MQ=255) | ACAGGGGGCCAGCCTGTTGCCGATTTTTCATCCAATGATGCTTTCACCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAGC > NC_000913/2517903‑2517999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |