| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,184,782 | Δ6,916 bp | ubiK–yqiI | ubiK, ygiL, yqiG, insC‑5, insD‑5, yqiG, yqiH, yqiI | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3184782 | 3191697 | 6916 | 156 [0] | [0] 157 | ubiK–yqiI | ubiK,ygiL,yqiG,insC‑5,insD‑5,yqiG,yqiH,yqiI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3184781 | 0 (0.000) | 151 (1.430) | 70/96 | 0.0 | 100% | intergenic (‑315/‑59) | ribB/ubiK | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/ubiquinone biosynthesis accessory factor UbiK |
| ? | NC_000913 | 3191698 = | 0 (0.000) | intergenic (+2/+41) | yqiI/glgS | putative fimbrial protein YqiI/surface composition regulator | |||||
Only 100 of 157 total aligned reads displayed.
AGGGACCGTTTAGTAAAGACGTAATCCTGAAAATCACCTATAACTAGTATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCTC > NC_000913/3191650‑3191747 | ctaatgattagcggcagcaacgcatagcttcacataattctggtttatat < 1:7391396‑M2/2‑1 (MQ=255)ctaatgattagcggcagcaacgcatagcttcacataattctggtttatat > 1:2765220‑M2/49‑50 (MQ=255)ctaatgattagcggcagcaacgcatagcttcacataattctggtttatat > 1:6592101‑M2/49‑50 (MQ=255) taatgattagcggcagcaacgcatagcttcacataattctggtttatATc > 1:646071‑M2/48‑50 (MQ=255) taatgattagcggcagcaacgcatagcttcacataattctggtttatATc > 1:1956565‑M2/48‑50 (MQ=255) aatgattagcggcagcaacgcatagcttcacataattctggtttatATc > 1:4887401‑M2/47‑49 (MQ=255) atgattagcggcagcaacgcatagcttcacataattctggtttatATc < 1:5783808‑M2/3‑1 (MQ=255) atgattagcggcagcaacgcatagcttcacataattctggtttatATCt > 1:2722606‑M2/46‑49 (MQ=255) atgattagcggcagcaacgcatagcttcacataattctggtttatATCt < 1:62626‑M2/4‑1 (MQ=255) atgattagcggcagcaacgcatagcttcacataattctggtttatATCt > 1:1992225‑M2/46‑49 (MQ=255) atgattagcggcagcaacgcatagcttcacataattctggtttatATCTa < 1:3772420‑M2/5‑1 (MQ=255) atgattagcggcagcaacgcatagcttcacataattctggtttatATCTa < 1:2091336‑M2/5‑1 (MQ=255) tgattagcggcagcaacgcatagcttcacataattctggtttatATCTaa > 1:6059803‑M2/45‑50 (MQ=255) tgattagcggcagcaacgcatagcttcacataattctggtttatATCTaa > 1:3737008‑M2/45‑50 (MQ=255) tgattagcggcagcaacgcatagcttcacataattctggtttatATCTaa < 1:3436773‑M2/6‑1 (MQ=255) gattagcggcagcaacgcatagcttcacataattctggtttatATCTaa > 1:2849306‑M2/44‑49 (MQ=255) attagcggcagcaacgcatagcttcacataattctggtttatATCTAATa < 1:674787‑M2/8‑1 (MQ=255) attagcggcagcaacgcatagcttcacataattctggtttatATCTAATa > 1:4683076‑M2/43‑50 (MQ=255) attagcggcagcaacgcatagcttcacataattctggtttatATCTAATa < 1:7821293‑M2/8‑1 (MQ=255) attagcggcagcaacgcatagcttcacataattctggtttatATCTAATa < 1:23974‑M2/8‑1 (MQ=255) attagcggcagcaacgcatagcttcacataattctggtttatATCTAATa < 1:1743738‑M2/8‑1 (MQ=255) attagcggcagcaacgcatagcttcacataattctggtttatATCTAATa < 1:474970‑M2/8‑1 (MQ=255) attagcggcagcaacgcatagcttcacataattctggtttatATCTAATa < 1:5208096‑M2/8‑1 (MQ=255) agcggcagcaacgcatagcttcacataattctggtttatATCTAATACa < 1:2225202‑M2/10‑1 (MQ=255) agcggcagcaacgcatagcttcacataattctggtttatATCTAATACa > 1:7520196‑M2/40‑49 (MQ=255) cggcagcaacgcatagcttcacataattctggtttatATCTAATACaaa > 1:4960317‑M2/38‑49 (MQ=255) cggcagcaacgcatagcttcacataattctggtttatATCTAATACaaa > 1:7261068‑M2/38‑49 (MQ=255) cggcagcaacgcatagcttcacataattctggtttatATCTAATACAAac < 1:531081‑M2/13‑1 (MQ=255) ggcagcaacgcatagcttcacataattctggtttatATCTAATACAAaca > 1:2825529‑M2/37‑50 (MQ=255) ggcagcaacgcatagcttcacataattctggtttatATCTAATACAAaca < 1:1711052‑M2/14‑1 (MQ=255) ggcagcaacgcatagcttcacataattctggtttatATCTAATACAAaca > 1:7071909‑M2/37‑50 (MQ=255) ggcagcaacgcatagcttcacataattctggtttatATCTAATACAAaca < 1:3887734‑M2/14‑1 (MQ=255) ggcagcaacgcatagcttcacataattctggtttatATCTAATACAAaca < 1:4095436‑M2/14‑1 (MQ=255) gcagcaacgcatagcttcacataattctggtttatATCTAATACAAacac > 1:1845560‑M2/36‑50 (MQ=255) gcagcaacgcatagcttcacataattctggtttatATCTAATACAAacac > 1:3920735‑M2/36‑50 (MQ=255) gcagcaacgcatagcttcacataattctggtttatATCTAATACAAacac < 1:1664210‑M2/15‑1 (MQ=255) agcaacgcatagcttcacataattctggtttatATCTAATACAAACACTa < 1:3241718‑M2/17‑1 (MQ=255) gcaacgcatagcttcacataattctggtttatATCTAATACAAACACTaa < 1:81521‑M2/18‑1 (MQ=255) gcaacgcatagcttcacataattctggtttatATCTAATACAAACACTa > 1:926817‑M2/33‑49 (MQ=255) caacgcatagcttcacataattctggtttatATCTAATACAAACACTaaa < 1:2490767‑M2/19‑1 (MQ=255) caacgcatagcttcacataattctggtttatATCTAATACAAACACTaa > 1:8011169‑M2/32‑49 (MQ=255) aacgcatagcttcacataattctggtttatATCTAATACAAACACTaaaa < 1:4776751‑M2/20‑1 (MQ=255) aacgcatagcttcacataattctggtttatATCTAATACAAACACTaaaa < 1:5586990‑M2/20‑1 (MQ=255) aacgcatagcttcacataattctggtttatATCTAATACAAACACTaaaa > 1:7231991‑M2/31‑50 (MQ=255) aacgcatagcttcacataattctggtttatATCTAATACAAACACTaaaa > 1:7601486‑M2/31‑50 (MQ=255) acgcatagcttcacataattctggtttatATCTAATACAAACACTAAAAc < 1:4386458‑M2/21‑1 (MQ=255) acgcatagcttcacataattctggtttatATCTAATACAAACACTAAAAc < 1:7552278‑M2/21‑1 (MQ=255) acgcatagcttcacataattctggtttatATCTAATACAAACACTAAAAc > 1:1164289‑M2/30‑50 (MQ=255) acgcatagcttcacataattctggtttatATCTAATACAAACACTAAAAc < 1:2982647‑M2/21‑1 (MQ=255) gcatagcttcacataattctggtttatATCTAATACAAACACTAAAACgg < 1:1399855‑M2/23‑1 (MQ=255) gcatagcttcacataattctggtttatATCTAATACAAACACTAAAACgg < 1:8175989‑M2/23‑1 (MQ=255) atagcttcacataattctggtttatATCTAATACAAACACTAAAACGGGc < 1:1219261‑M2/25‑1 (MQ=255) tagcttcacataattctggtttatATCTAATACAAACACTAAAACGGGc > 1:7839631‑M2/25‑49 (MQ=255) agcttcacataattctggtttatATCTAATACAAACACTAAAACGGGCCa > 1:2690309‑M2/24‑50 (MQ=255) gcttcacataattctggtttatATCTAATACAAACACTAAAACGGGCCAt < 1:2664951‑M2/28‑1 (MQ=255) gcttcacataattctggttgatATCTAATACAAACACTAAAACGGGCCa < 1:5103167‑M2/27‑1 (MQ=255) cttcacataattctggtttatATCTAATACAAACACTAAAACGGGCCAt > 1:1085847‑M2/22‑49 (MQ=255) cttcacataattctggtttatATCTAATACAAACACTAAAACGGGCCAt > 1:6051517‑M2/22‑49 (MQ=255) cttcacataattctggtttatATCTAATACAAACACTAAAACGGGCCAt > 1:662027‑M2/22‑49 (MQ=255) ttcacataattctggtttatATCTAATACAAACACTAAAACGGGCCAt > 1:2095541‑M2/21‑48 (MQ=255) tcacataattctggtttatATCTAATACAAACACTAAAACGGGCCATCAg > 1:1809711‑M2/20‑50 (MQ=255) tcacataattctggtttatATCTAATACAAACACTAAAACGGGCCATCAg > 1:4235195‑M2/20‑50 (MQ=255) cacataattctggtttatATCTAATACAAACACTAAAACGGGCCATCAgg > 1:5945848‑M2/19‑50 (MQ=255) cacataattctggtttatATCTAATACAAACACTAAAACGGGCCATCAgg > 1:3512708‑M2/19‑50 (MQ=255) acataattctggtttatATCTAATACAAACACTAAAACGGGCCATCAgg < 1:5587724‑M2/32‑1 (MQ=255) acataattctggtttatATCTAATACAAACACTAAAACGGGCCATCAgg < 1:4421913‑M2/32‑1 (MQ=255) cataattctggtttatATCTAATACAAACACTAAAACGGGCCATCAGGcc > 1:7743130‑M2/17‑50 (MQ=255) cataattctggtttatATCTAATACAAACACTAAAACGGGCCATCAGGcc > 1:7951199‑M2/17‑50 (MQ=255) ataattctggtttatATCTAATACAAACACTAAAACGGGCCATCAGGccc > 1:7100533‑M2/16‑50 (MQ=255) ataattctggtttatATCTAATACAAACACTAAAACGGGCCATCAGGccc < 1:310735‑M2/35‑1 (MQ=255) ataattctggtttatATCTAATACAAACACTAAAACGGGCCATCAGGccc < 1:2354123‑M2/35‑1 (MQ=255) taattctggtttatATCTAATACAAACACTAAAACGGGCCATCAGGCCCg < 1:4184112‑M2/36‑1 (MQ=255) taattctggtttatATCTAATACAAACACTAAAACGGGCCATCAGGCCCg < 1:2051282‑M2/36‑1 (MQ=255) taattctggtttatATCTAATACAAACACTAAAACGGGCCATCAGGCCCg > 1:1242159‑M2/15‑50 (MQ=255) taattctggtttatATCTAATACAAACACTAAAACGGGCCATCAGGCCCg > 1:5128008‑M2/15‑50 (MQ=255) taattctggtttatATCTAATACAAACACTAAAACGGGCCATCAGGCCCg < 1:3906762‑M2/36‑1 (MQ=255) aattctggtttatATCTAATACAAACACTAAAACGGGCCATCAGGCCCGt > 1:5284489‑M2/14‑50 (MQ=255) aattctggtttatATCTAATACAAACACTAAAACGGGCCATCAGGCCCGt > 1:3351836‑M2/14‑50 (MQ=255) aattctggtttatATCTAATACAAACACTAAAACGGGCCATCAGGCCCGt > 1:7536618‑M2/14‑50 (MQ=255) attctggtttatATCTAATACAAACACTAAAACGGGCCATCAGGCCCGt > 1:7928675‑M2/13‑49 (MQ=255) attctggtttatATCTAATACAAACACTAAAACGGGCCATCAGGCCCGt > 1:3561156‑M2/13‑49 (MQ=255) ttctggtttatATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTta > 1:5615044‑M2/12‑50 (MQ=255) ttctggtttatATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTta > 1:621869‑M2/12‑50 (MQ=255) ggtttatATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTatat > 1:1894758‑M2/8‑49 (MQ=255) ggtttatATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTatat > 1:6460578‑M2/8‑49 (MQ=255) gtttatATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCa < 1:6399440‑M2/44‑1 (MQ=255) ttatATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGt > 1:7311323‑M2/5‑50 (MQ=255) ttatATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGt > 1:2558285‑M2/5‑50 (MQ=255) tatATCTAATACAAACACTAAAACGGGCCATCATGCCCGTTATATCAGTg > 1:4798666‑M2/4‑50 (MQ=255) tatATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTg > 1:3153493‑M2/4‑50 (MQ=255) tatATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTg > 1:7829968‑M2/4‑50 (MQ=255) tatATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTg > 1:5304412‑M2/4‑50 (MQ=255) atATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTg < 1:7097988‑M2/47‑1 (MQ=255) atATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGc > 1:5265371‑M2/3‑50 (MQ=255) atATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGc > 1:3378481‑M2/3‑50 (MQ=255) tATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGc < 1:3280963‑M2/48‑1 (MQ=255) tATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCt > 1:674941‑M2/2‑50 (MQ=255) tATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCt > 1:1399928‑M2/2‑50 (MQ=255) tATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTCCt < 1:7340337‑M2/49‑1 (MQ=255) aTCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGctc > 1:1887970/1‑50 (MQ=255) | AGGGACCGTTTAGTAAAGACGTAATCCTGAAAATCACCTATAACTAGTATCTAATACAAACACTAAAACGGGCCATCAGGCCCGTTATATCAGTGCTC > NC_000913/3191650‑3191747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |