| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,286,401 | Δ3,780 bp | [yejO]–[yejO] | [yejO], insH‑8, [yejO] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2286401 | 2290180 | 3780 | 111 [0] | [0] 108 | [yejO]–[yejO] | [yejO],insH‑8,[yejO] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2286400 | 0 (0.000) | 108 (1.080) | 68/98 | 0.0 | 100% | pseudogene (2515/2525 nt) | yejO | adhesin‑like autotransporter YejO |
| ? | NC_000913 | 2290181 = | 0 (0.000) | intergenic (‑1/‑319) | yejO/narP | adhesin‑like autotransporter YejO/DNA‑binding transcriptional dual regulator NarP | |||||
Only 100 of 108 total aligned reads displayed.
CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2286352‑2286400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAG > NC_000913/2290181‑2290229 CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:696527/1‑50CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:403568/1‑50 AGACCGTGACGCATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTG < 1:3393561/50‑1 AGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:3884905/1‑49 AGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:4370135/1‑49 GACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGA < 1:525239/50‑1 ACCGTGATACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAG > 1:4181005/1‑50 CCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGC > 1:6620843/1‑50 CCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGC < 1:1708764/50‑1 CCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGC > 1:2850582/1‑50 CGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCT < 1:4364326/50‑1 GTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTT < 1:5511883/50‑1 TGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTT > 1:6879792/1‑50 TGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTT > 1:4870882/1‑50 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCA > 1:2122117/1‑50 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCA < 1:7181211/50‑1 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTC < 1:2748423/49‑1 ACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATC < 1:2622254/50‑1 ACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATC < 1:3257739/50‑1 CATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC < 1:2870577/50‑1 CATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC > 1:2293700/1‑50 ATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC > 1:3828502/1‑49 TCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTA < 1:3524179/50‑1 CACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTAT > 1:7473242/1‑50 CACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTAT > 1:5445107/1‑50 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATG < 1:6186474/50‑1 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTAT < 1:5329693/49‑1 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTAT > 1:826462/1‑49 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTAT > 1:6613092/1‑49 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTAT > 1:3859664/1‑49 CAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGA < 1:3804153/50‑1 CAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATG > 1:5170412/1‑49 CAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATG > 1:506963/1‑49 AGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAA < 1:5279325/50‑1 AGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGA > 1:752752/1‑49 CCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT > 1:1914812/1‑50 CCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT < 1:879575/50‑1 CCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT < 1:6620800/50‑1 CTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATT < 1:908768/50‑1 CTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATT < 1:3254949/50‑1 TGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATT > 1:499580/1‑49 GTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAA > 1:1930942/1‑50 GTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAA > 1:6424659/1‑50 GTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAA > 1:4909343/1‑50 TTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAAT > 1:294158/1‑50 TTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAA < 1:5932395/49‑1 TTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATT > 1:5056488/1‑50 TTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATT > 1:3434809/1‑50 TTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATT > 1:6831233/1‑50 TTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATT > 1:4809123/1‑50 TATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATT < 1:5636468/49‑1 TATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATT < 1:3314064/49‑1 ATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTG < 1:4211664/49‑1 ATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTG < 1:775546/49‑1 TTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCT < 1:6435967/50‑1 TTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTG < 1:1202323/49‑1 TCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGT < 1:1616251/49‑1 TCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGT < 1:1883260/49‑1 GTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAA > 1:3344112/1‑49 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAA < 1:4184053/49‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAA > 1:6103343/1‑48 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAA < 1:1436591/48‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAA < 1:4146870/48‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTA < 1:5930869/47‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTA < 1:687753/47‑1 TTATCAGAACGGCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAA < 1:7480572/50‑1 TATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 1:4179941/1‑50 TATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 1:6198179/1‑50 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG < 1:3915156/49‑1 TCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCA > 1:2357356/1‑50 TCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCA < 1:4906465/50‑1 TCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGC < 1:6615691/49‑1 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT < 1:5259872/50‑1 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT > 1:7608513/1‑50 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT < 1:3600929/50‑1 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAT < 1:3777097/49‑1 GAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTG < 1:1634193/50‑1 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG > 1:4793841/1‑50 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG > 1:1348217/1‑50 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG < 1:2128219/50‑1 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG > 1:2781417/1‑50 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG < 1:4424022/50‑1 ACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGG < 1:759908/50‑1 ACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGG < 1:3417268/50‑1 CGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGT < 1:6682198/50‑1 CGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGT < 1:2794712/50‑1 CGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGT < 1:7392271/50‑1 CGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGT < 1:6781306/50‑1 CGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGG > 1:6813653/1‑49 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:2893841/1‑50 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA < 1:4302899/50‑1 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:4952590/1‑50 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:6094654/1‑50 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:1289825/1‑50 TCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:1760879/1‑49 CTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAG < 1:7119668/50‑1 CTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACA < 1:1621979/49‑1 CTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:748791/1‑47 CTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:80020/1‑47 CTGAGCTTTCATCCTATGAAATTAACTGCTGTTAAAAGCATTGGGTA > 1:1621082/1‑47 CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2286352‑2286400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAG > NC_000913/2290181‑2290229 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |