| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,466,545 | Δ9,634 bp | [intS]–[ypdJ] | 15 genes [intS], yfdG, yfdH, yfdI, yfdK, yfdL, yfdM, yfdN, yfdO, yfdP, yfdQ, yfdR, yfdS, [yfdT], [ypdJ] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2466545 | 2476178 | 9634 | 105 [0] | [0] 102 | [intS]–[ypdJ] | [intS],yfdG,yfdH,yfdI,yfdK,yfdL,yfdM,yfdN,yfdO,yfdP,yfdQ,yfdR,yfdS,[yfdT],[ypdJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2466544 | 0 (0.000) | 100 (1.000) | 56/98 | 0.0 | 100% | intergenic (+161/‑1) | argW/intS | tRNA‑Arg/CPS‑53 (KpLE1) prophage; prophage CPS‑53 integrase |
| ? | NC_000913 | 2476179 = | 0 (0.000) | coding (86/141 nt) | ypdJ | CPS‑53 (KpLE1) prophage; putative uncharacterized protein YpdJ | |||||
Only 100 of 102 total aligned reads displayed.
ACGAGCTGGTATCCATTTTTCAACAATGTCACAACAAGAGGTGAAATAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATA > NC_000913/2476130‑2476228 | tgacgggtaaaaagtggataaaataattttacccaccggatttttaccct < 1:1256780‑M2/1‑1 (MQ=255)tgacgggtaaaaagtggataaaataattttacccaccggatttttaccct < 1:5343438‑M2/1‑1 (MQ=255) acgggtaaaaagtggataaaataattttacccaccggatttttacccTag < 1:12379‑M2/3‑1 (MQ=255) cgggtaaaaagtggataaaataattttacccaccggatttttacccTaga < 1:5386748‑M2/4‑1 (MQ=255) cgggtaaaaagtggataaaataattttacccaccggatttttacccTaga < 1:3653172‑M2/4‑1 (MQ=255) gggtaaaaagtggataaaataattttacccaccggatttttacccTagag > 1:7012664‑M2/46‑50 (MQ=255) gggtaaaaagtggataaaataattttacccaccggatttttacccTagag > 1:682986‑M2/46‑50 (MQ=255) ggtaaaaagtggataaaataattttacccaccggatttttacccTAGAGc < 1:7356349‑M2/6‑1 (MQ=255) taaaaagtggataaaataattttacccaccggatttttacccTAGAGCCa > 1:6810316‑M2/43‑50 (MQ=255) taaaaagtggataaaataattttacccaccggatttttacccTAGAGCCa > 1:3207352‑M2/43‑50 (MQ=255) taaaaagtggataaaataattttacccaccggatttttacccTAGAGCCa > 1:3098498‑M2/43‑50 (MQ=255) aaaaagtggataaaataattttacccaccggatttttacccTAGAGCCa > 1:6423145‑M2/42‑49 (MQ=255) aaaaagtggataaaataattttacccaccggatttttacccTAGAGCCa > 1:5700018‑M2/42‑49 (MQ=255) aaaagtggataaaataattttacccaccggatttttacccTAGAGCCATa > 1:5761020‑M2/41‑50 (MQ=255) aaaagtggataaaataattttacccaccggatttttacccTAGAGCCATa > 1:2344726‑M2/41‑50 (MQ=255) aaaagtggataaaataattttaccaaccggatttttacccTAGAGCAATa > 1:4501606‑M2/41‑50 (MQ=255) aaagtggataaaataattttacccaccggatttttacccTAGAGCCATa > 1:1914481‑M2/40‑49 (MQ=255) aaagtggataaaataattttacccaccggatttttacccTAGAGCCATa > 1:3152261‑M2/40‑49 (MQ=255) aaagtggataaaataattttacccaccggatttttacccTAGAGCCATa > 1:6817714‑M2/40‑49 (MQ=255) aaagtggataaaataattttacccaccggatttttacccTAGAGCCATa > 1:6562894‑M2/40‑49 (MQ=255) aaagtggataaaataattttacccaccggatttttacccTAGAGCCATAc < 1:1929514‑M2/11‑1 (MQ=255) aagtggataaaataattttacccaccggatttttacccTAGAGCCATa > 1:5406881‑M2/39‑48 (MQ=255) agtggataaaataattttacccaccggatttttacccTAGAGCCATACAg > 1:3877714‑M2/38‑50 (MQ=255) agtggataaaataattttacccaccggatttttacccTAGAGCCATACAg > 1:1360260‑M2/38‑50 (MQ=255) tggataaaataattttacccaccggatttttacccTAGAGCCATACAGcc > 1:3012314‑M2/36‑50 (MQ=255) tggataaaataattttacccaccggatttttacccTAGAGCCATACAGcc > 1:2065699‑M2/36‑50 (MQ=255) tggataaaataattttacccaccggatttttacccTAGAGCCATACAGcc > 1:3324452‑M2/36‑50 (MQ=255) ggataaaataattttacccaccggatttttacccTAGAGCCATACAGCCt > 1:6666602‑M2/35‑50 (MQ=255) ggataaaataattttacccaccggatttttacccTAGAGCCATACAGCCt > 1:4598885‑M2/35‑50 (MQ=255) gataaaataattttacccaccggatttttacccTAGAGCCATACAGCCTc < 1:5487344‑M2/17‑1 (MQ=255) gataaaataattttacccaccggatttttacccTAGAGCCATACAGCCTc < 1:1806422‑M2/17‑1 (MQ=255) gataaaataattttacccaccggatttttacccTAGAGCCATACAGCCTc < 1:4197253‑M2/17‑1 (MQ=255) ataaaataattttacccaccggatttttacccTAGAGCCATACAGCCTca > 1:6820793‑M2/33‑50 (MQ=255) ataaaataattttacccaccggatttttacccTAGAGCCATACAGCCTca < 1:7174314‑M2/18‑1 (MQ=255) ataaaataattttacccaccggatttttacccTAGAGCCATACAGCCTca > 1:5019650‑M2/33‑50 (MQ=255) taaaataattttacccaccggatttttacccTAGAGCCATACAGCCTca > 1:3957691‑M2/32‑49 (MQ=255) aaaataattttacccaccggatttttacccTAGAGCCATACAGCCTcaca > 1:5871578‑M2/31‑50 (MQ=255) aaataattttacccaccggatttttacccTAGAGCCATACAGCCTcaca < 1:124601‑M2/20‑1 (MQ=255) aaataattttacccaccggatttttacccTAGAGCCATACAGCCTCacac > 1:2056105‑M2/30‑50 (MQ=255) aaataattttacccaccggatttttacccTAGAGCCATACAGCCTCacac > 1:2515486‑M2/30‑50 (MQ=255) aataattttacccaccggatttttacccTAGAGCCATACAGCCTCACACt < 1:2158858‑M2/22‑1 (MQ=255) aataattttacccaccggatttttacccTAGAGCCATACAGCCTCACACt < 1:1441332‑M2/22‑1 (MQ=255) ataattttacccaccggatttttacccTAGAGCCATACAGCCTCACACTc < 1:7564298‑M2/23‑1 (MQ=255) ataattttacccaccggatttttacccTAGAGCCATACAGCCTCACACTc < 1:6648838‑M2/23‑1 (MQ=255) taattttacccaccggatttttacccTAGAGCCATACAGCCTCACACTc > 1:5426428‑M2/27‑49 (MQ=255) taattttacccaccggatttttacccTAGAGCCATACAGCCTCACACTc > 1:1435991‑M2/27‑49 (MQ=255) attttacccaccggatttttacccTAGAGCCATACAGCCTCACACTCGAt < 1:3878101‑M2/26‑1 (MQ=255) attttacccaccggatttttacccTAGAGCCATACAGCCTCACACTCGAt < 1:4115607‑M2/26‑1 (MQ=255) attttacccaccggatttttacccTAGAGCCATACAGCCTCACACTCGAt < 1:1963243‑M2/26‑1 (MQ=255) attttacccaccggatttttacccTAGAGCCATACAGCCTCACACTCGAt > 1:4375435‑M2/25‑50 (MQ=255) ttttacccaccggatttttacccTAGAGCCATACAGCCTCACACTCGAt > 1:6634425‑M2/24‑49 (MQ=255) ttttacccaccggatttttacccTAGAGCCATACAGCCTCACACTCGAt > 1:3237041‑M2/24‑49 (MQ=255) ttttacccaccggatttttacccTAGAGCCATACAGCCTCACACTCGAt > 1:4815106‑M2/24‑49 (MQ=255) ttttacccaccggatttttacccTAGAGCCATACAGCCTCACACTCGATg < 1:5683454‑M2/27‑1 (MQ=255) tttacccaccggatttttacccTAGAGCCATACAGCCTCACACTCGAt > 1:5079686‑M2/23‑48 (MQ=255) ttacccaccggatttttacccTAGAGCCATACAGCCTCACACTCGATGAg > 1:7354887‑M2/22‑50 (MQ=255) tacccaccggatttttacccTAGAGCCATACAGCCTCACACTCGATGAgg > 1:5060260‑M2/21‑50 (MQ=255) tacccaccggatttttacccTAGAGCCATACAGCCTCACACTCGATGAg < 1:435168‑M2/29‑1 (MQ=255) acccaccggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGc > 1:5294032‑M2/20‑50 (MQ=255) acccaccggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGc > 1:2673661‑M2/20‑50 (MQ=255) cccaccggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGcc > 1:7335221‑M2/19‑50 (MQ=255) cccaccggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGcc > 1:703232‑M2/19‑50 (MQ=255) ccaccggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCt > 1:2462119‑M2/18‑50 (MQ=255) ccaccggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCt > 1:1712934‑M2/18‑50 (MQ=255) caccggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTg > 1:6490712‑M2/17‑50 (MQ=255) caccggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTg > 1:7116039‑M2/17‑50 (MQ=255) accggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGt > 1:4989989‑M2/16‑50 (MQ=255) ccggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGt > 1:146197‑M2/15‑49 (MQ=255) ccggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGt > 1:4887536‑M2/15‑49 (MQ=255) cggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGt > 1:3545717‑M2/14‑48 (MQ=255) cggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGt > 1:3930072‑M2/14‑48 (MQ=255) cggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCa < 1:2183665‑M2/37‑1 (MQ=255) ggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAg < 1:3274325‑M2/38‑1 (MQ=255) ggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAg > 1:3893820‑M2/13‑50 (MQ=255) ggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAg > 1:7552915‑M2/13‑50 (MQ=255) ggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAg > 1:2923603‑M2/13‑50 (MQ=255) ggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAg > 1:1165622‑M2/13‑50 (MQ=255) ggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAg > 1:5333024‑M2/13‑50 (MQ=255) ggatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAg > 1:5766838‑M2/13‑50 (MQ=255) gatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGt > 1:3913923‑M2/12‑50 (MQ=255) gatttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGt > 1:3836101‑M2/12‑50 (MQ=255) atttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGtt > 1:7383974‑M2/11‑50 (MQ=255) atttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGtt > 1:2926674‑M2/11‑50 (MQ=255) tttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGttt > 1:1646888‑M2/10‑50 (MQ=255) ttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTc > 1:4664363‑M2/9‑50 (MQ=255) ttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTc > 1:1812183‑M2/9‑50 (MQ=255) ttttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTc > 1:3344474‑M2/9‑50 (MQ=255) tttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCt > 1:7589961‑M2/8‑50 (MQ=255) tttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCt > 1:2533320‑M2/8‑50 (MQ=255) tttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCt > 1:4856811‑M2/8‑50 (MQ=255) ttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCt > 1:6321862‑M2/7‑49 (MQ=255) ttacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCt < 1:614653‑M2/43‑1 (MQ=255) tacccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCtt > 1:6946934‑M2/6‑49 (MQ=255) acccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTa > 1:4587099‑M2/5‑49 (MQ=255) acccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTa < 1:7404218‑M2/45‑1 (MQ=255) cccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTaaa < 1:3556682‑M2/47‑1 (MQ=255) ccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTaaaa > 1:7401291‑M2/3‑50 (MQ=255) ccTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTaaaa > 1:1901575‑M2/3‑50 (MQ=255) cTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAt < 1:5267666‑M2/49‑1 (MQ=255) taGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAata > 1:3986917/1‑50 (MQ=255) | ACGAGCTGGTATCCATTTTTCAACAATGTCACAACAAGAGGTGAAATAATAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAATA > NC_000913/2476130‑2476228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |