| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,720,634 | Δ1,442 bp | IS150‑mediated | insJ–insK | insJ, insK |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3720634 | 3722075 | 1442 | 165 [0] | [0] 165 | insJ–insK | insJ,insK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3720633 | 0 (0.000) | 164 (1.640) | 71/98 | 0.0 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 3722076 = | 0 (0.000) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta | |||||
Only 100 of 165 total aligned reads displayed.
GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTG > NC_000913/3722028‑3722124 | tatatttctgcgcattcccagcctcctgtgttgatttccaacgagtataa > 1:3832600‑M2/49‑50 (MQ=255)tatatttctgcgcattcccagcctcctgtgttgatttccaacgagtataa > 1:5622641‑M2/49‑50 (MQ=255) atatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAAc > 1:5879001‑M2/48‑50 (MQ=255) atatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAAc > 1:4130813‑M2/48‑50 (MQ=255) atatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAAc > 1:1499742‑M2/48‑50 (MQ=255) tatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAAc < 1:5278941‑M2/3‑1 (MQ=255) tatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACt < 1:6074391‑M2/4‑1 (MQ=255) atttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACtt > 1:6115032‑M2/46‑50 (MQ=255) tttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACttt < 1:3539562‑M2/6‑1 (MQ=255) tttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACttt > 1:3810709‑M2/45‑50 (MQ=255) tttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACttt > 1:4882494‑M2/45‑50 (MQ=255) tttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACttt > 1:1397175‑M2/45‑50 (MQ=255) tttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACttt > 1:6649273‑M2/45‑50 (MQ=255) tttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACtt < 1:1644267‑M2/5‑1 (MQ=255) ttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACttt > 1:5060422‑M2/44‑49 (MQ=255) ttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACttt > 1:3929138‑M2/44‑49 (MQ=255) tctgcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTg < 1:5719875‑M2/7‑1 (MQ=255) tctgcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTg < 1:3952560‑M2/7‑1 (MQ=255) tctgcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGa > 1:4843467‑M2/43‑50 (MQ=255) tctgcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGa > 1:6333392‑M2/43‑50 (MQ=255) gcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAtt > 1:7403484‑M2/40‑49 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgcgtatAACTTTGATTta > 1:1394447‑M2/39‑50 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAttt < 1:7052128‑M2/11‑1 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAttt < 1:708275‑M2/11‑1 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAttt < 1:6775794‑M2/11‑1 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAttt < 1:1105479‑M2/11‑1 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAt < 1:4827588‑M2/9‑1 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAt < 1:7323379‑M2/9‑1 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta < 1:2822031‑M2/12‑1 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta < 1:3675830‑M2/12‑1 (MQ=255) gcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTtat < 1:1073502‑M2/13‑1 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTtata < 1:2617075‑M2/14‑1 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTtata < 1:6043410‑M2/14‑1 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTtata < 1:4309928‑M2/14‑1 (MQ=255) cattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTtata < 1:3413115‑M2/14‑1 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAg < 1:3575429‑M2/15‑1 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAg < 1:3738797‑M2/15‑1 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAg > 1:2340594‑M2/36‑50 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAg < 1:7295027‑M2/15‑1 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAg < 1:4515373‑M2/15‑1 (MQ=255) ttcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGt < 1:6776234‑M2/16‑1 (MQ=255) ttcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGt < 1:7263205‑M2/16‑1 (MQ=255) cccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTc < 1:5094226‑M2/17‑1 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCa < 1:1600975‑M2/18‑1 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCa < 1:4163639‑M2/18‑1 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAg > 1:5472781‑M2/32‑50 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAg < 1:7394964‑M2/19‑1 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAg < 1:3382074‑M2/19‑1 (MQ=255) ccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAg > 1:3851751‑M2/32‑50 (MQ=255) cagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAgg > 1:1553127‑M2/31‑50 (MQ=255) agcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGt > 1:4224521‑M2/30‑50 (MQ=255) agcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGt < 1:1290368‑M2/21‑1 (MQ=255) agcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGt < 1:6412002‑M2/21‑1 (MQ=255) gcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAtgtg > 1:374999‑M2/29‑50 (MQ=255) gcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTg > 1:1853174‑M2/29‑50 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTgggg < 1:808824‑M2/25‑1 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGc < 1:743639‑M2/26‑1 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGc < 1:2947326‑M2/26‑1 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGc < 1:6558923‑M2/26‑1 (MQ=255) ctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCt > 1:3415307‑M2/24‑50 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCtttt < 1:6395555‑M2/30‑1 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCtttt < 1:1556786‑M2/30‑1 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCtttt < 1:1000891‑M2/30‑1 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCtttt > 1:5092952‑M2/21‑50 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCttt < 1:5267388‑M2/29‑1 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCtt < 1:6532132‑M2/28‑1 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCtt < 1:2327726‑M2/28‑1 (MQ=255) tgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCtt < 1:4296194‑M2/28‑1 (MQ=255) gttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtc > 1:7383834‑M2/20‑50 (MQ=255) gttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtc > 1:5140659‑M2/20‑50 (MQ=255) gttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtc > 1:1871595‑M2/20‑50 (MQ=255) ttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtct < 1:6050465‑M2/32‑1 (MQ=255) ttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtc < 1:2260313‑M2/31‑1 (MQ=255) gatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtctc < 1:6933314‑M2/33‑1 (MQ=255) gatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtctc < 1:5065071‑M2/33‑1 (MQ=255) gatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTctct > 1:533724‑M2/17‑50 (MQ=255) atttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTctct < 1:1991359‑M2/34‑1 (MQ=255) atttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTctct < 1:2929829‑M2/34‑1 (MQ=255) atttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctg > 1:2659685‑M2/16‑50 (MQ=255) atttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctg > 1:223227‑M2/16‑50 (MQ=255) atttccaacgagtatAACTTTGATTTATAATCAGGTGGGGCTTTTCtctg < 1:7137272‑M2/35‑1 (MQ=255) tttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgt > 1:6096784‑M2/15‑50 (MQ=255) tttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgt < 1:7427637‑M2/36‑1 (MQ=255) tttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgt < 1:5473433‑M2/36‑1 (MQ=255) tttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgt < 1:5038692‑M2/36‑1 (MQ=255) tccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtct > 1:4369473‑M2/13‑50 (MQ=255) ccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtctg > 1:4942610‑M2/12‑50 (MQ=255) ccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtctg > 1:1795234‑M2/12‑50 (MQ=255) ccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtct < 1:4661102‑M2/38‑1 (MQ=255) ccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtct < 1:3466093‑M2/38‑1 (MQ=255) aacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGcc > 1:1272835‑M2/10‑50 (MQ=255) aacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGcc > 1:1242277‑M2/10‑50 (MQ=255) acgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCt < 1:1348633‑M2/42‑1 (MQ=255) tatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCgg < 1:5744321‑M2/47‑1 (MQ=255) atAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGt > 1:2586559‑M2/3‑50 (MQ=255) tAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGt > 1:4486751‑M2/2‑49 (MQ=255) tAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGt > 1:4029004‑M2/2‑49 (MQ=255) tAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGt < 1:100472‑M2/48‑1 (MQ=255) tAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTg < 1:1738340‑M2/49‑1 (MQ=255) aaCTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTg > 1:5066242/1‑49 (MQ=255) | GACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTG > NC_000913/3722028‑3722124 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |