| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2066304 | NA (NA) | 83 (0.940) | 55/98 | 0.0 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor | |||||
AGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2066257‑2066304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080592‑2080640 AGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGC < 1:984753/50‑1 GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCA < 1:3043930/50‑1 GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCA < 1:5302271/50‑1 GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCA < 1:1789029/50‑1 GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:3211473/1‑48 GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:5999696/1‑48 GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:1664329/1‑48 CCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAG < 1:1701576/50‑1 tTATTTAGACCGTTTCTTCGCCATTTACGGCGTTATCCCCCGCTTGCAG > 1:241970/2‑49 TATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA > 1:1932608/1‑49 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAAC < 1:131116/50‑1 TAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTC > 1:5719098/1‑50 TAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTC > 1:1121173/1‑50 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG > 1:2150586/1‑50 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC < 1:297545/49‑1 ACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGT < 1:5999393/50‑1 ACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGT < 1:2782243/50‑1 ACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGT < 1:1915624/50‑1 ACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGT < 1:564001/50‑1 ACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG > 1:5920115/1‑49 ACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG > 1:1822924/1‑49 ACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG > 1:543385/1‑49 CCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTA < 1:4897797/50‑1 CCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTA < 1:1343005/50‑1 CCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTA < 1:5430009/50‑1 CGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA < 1:1965850/50‑1 CGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA > 1:3891691/1‑50 CGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA > 1:1496593/1‑50 GTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:817455/1‑50 GTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT < 1:2846396/50‑1 GTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:99042/1‑50 TTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATG < 1:3420941/50‑1 TTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:5660137/1‑48 TTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:1159503/1‑48 TTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:2074501/1‑48 CTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:1259565/1‑46 CGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATT < 1:638006/49‑1 CGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATT > 1:2006440/1‑49 CGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGAT < 1:6696044/48‑1 CGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGA < 1:5655050/47‑1 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA < 1:2182033/50‑1 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTA > 1:1843166/1‑49 CATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAA < 1:5528369/50‑1 CATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA > 1:321122/1‑48 CATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA > 1:2467282/1‑48 ATTTAAGGCGTTATACCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAG < 1:5791464/50‑1 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGC < 1:4434082/50‑1 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGC > 1:1951430/1‑50 TTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCG > 1:5225478/1‑50 TAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGC > 1:827221/1‑50 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT < 1:2741165/49‑1 GGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCA < 1:2104806/50‑1 GGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCA > 1:149766/1‑50 GCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT < 1:253889/50‑1 CGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATA < 1:2477625/50‑1 GTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAA > 1:3348208/1‑50 GTTATCCCCAGCTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAA > 1:4184702/1‑50 TTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAC > 1:6680440/1‑50 TTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAC > 1:3954182/1‑50 TATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACT > 1:6307657/1‑50 ATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACT < 1:5125541/49‑1 ATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACT > 1:6021823/1‑49 ATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACT > 1:2678547/1‑49 TCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCA > 1:3072638/1‑50 TCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCA < 1:5645205/50‑1 TCCCCAGTTTGCAGAAACCCCGTAATGAGATTAAAAGCGCTCATAACTC < 1:5865906/49‑1 CCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCAT > 1:4538985/1‑50 CCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCAT > 1:4248633/1‑50 CCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCAT > 1:3075273/1‑50 CCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATC > 1:6282998/1‑50 CCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCAT < 1:3018486/49‑1 CCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCT < 1:4758201/50‑1 CCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCT < 1:45978/50‑1 CCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCT < 1:202263/50‑1 CAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTG < 1:1105748/50‑1 AGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGT < 1:2558837/50‑1 AGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGT < 1:1064659/50‑1 GTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC < 1:6280601/50‑1 GTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC < 1:5288139/50‑1 GTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC > 1:3256110/1‑50 TTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCG > 1:411068/1‑50 TGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > 1:3548249/1‑50 TGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > 1:2234922/1‑50 AGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2066257‑2066304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080592‑2080640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |