| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 95 [0] | [0] 95 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 93 (1.050) | 54/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601154‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATC > NC_000913/2614796‑2614843 TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCG > 1:1532649/1‑49TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCG > 1:2108857/1‑49TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC < 1:2428567/48‑1TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC < 1:5889635/48‑1TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC < 1:5585262/48‑1TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC < 1:5385152/48‑1 ATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGA > 1:1896118/1‑49 TGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAA > 1:576165/1‑50 TGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAA < 1:2979995/50‑1 GCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAA > 1:2911314/1‑49 CAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAAC < 1:6593610/49‑1 CAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAAC < 1:3681023/49‑1 AATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAG < 1:3188058/50‑1 AATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAG < 1:3762258/50‑1 ATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGT < 1:1195073/50‑1 TATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTT < 1:6704997/50‑1 TATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTT < 1:4286197/50‑1 ATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC > 1:1414056/1‑50 ATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC > 1:2498545/1‑50 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC < 1:1616888/49‑1 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC < 1:2229681/49‑1 GAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGT > 1:4099986/1‑50 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC < 1:3571118/50‑1 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC < 1:342464/50‑1 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC < 1:231727/50‑1 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC < 1:6417328/50‑1 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGT < 1:3037224/49‑1 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGT < 1:1149759/49‑1 AATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCG < 1:5363020/50‑1 ATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG < 1:4342205/50‑1 ATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG < 1:5165437/50‑1 ATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG > 1:5298161/1‑50 ATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG > 1:5973239/1‑50 TGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGG < 1:6336375/50‑1 GCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGC > 1:3575159/1‑50 GCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGC > 1:1288087/1‑50 CAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCT > 1:986378/1‑50 ATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:700478/1‑49 TGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAA < 1:6499264/50‑1 TGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAA < 1:2392681/50‑1 TGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:2858207/1‑48 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGA < 1:284624/50‑1 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:5965970/1‑46 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:5788549/1‑46 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:5673182/1‑50 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:6556449/1‑50 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:1975288/1‑50 TTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:2699630/1‑50 TCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:1854502/1‑49 CATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA > 1:1249049/1‑50 CATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA > 1:446500/1‑50 CATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA > 1:1392248/1‑50 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA < 1:980226/49‑1 TATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATT > 1:2541165/1‑50 TATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATT > 1:4117954/1‑50 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTat < 1:6404425/50‑3 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCT > 1:2241527/1‑50 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCT > 1:6211055/1‑50 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCT < 1:2946066/50‑1 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTC < 1:2171944/49‑1 CATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTT > 1:4344890/1‑50 CATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTT > 1:5570136/1‑50 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG > 1:2978382/1‑50 TTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCG > 1:1238426/1‑50 TTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGC > 1:1811276/1‑50 TTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGC > 1:3290117/1‑50 TTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGC > 1:5101333/1‑50 TTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCG < 1:4255406/49‑1 TTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCG < 1:2356808/49‑1 CAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGA > 1:4838478/1‑50 CAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCG < 1:1923025/49‑1 CAAGGAGCCGACCGAAACAGTTCGTCGGGATGAAGATTATTCTTGCGCG < 1:6002097/49‑1 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAT < 1:2759606/50‑1 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAT > 1:5474797/1‑50 AAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAT < 1:900803/50‑1 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATT > 1:2658111/1‑50 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATT < 1:5830710/50‑1 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATT > 1:1665646/1‑50 GAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTG < 1:2726334/50‑1 GAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTG > 1:4450444/1‑50 GAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTG < 1:2498869/50‑1 GCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCC > 1:3254779/1‑50 GCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCC > 1:1844592/1‑50 CCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCC < 1:3349471/50‑1 CCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCC < 1:2978903/50‑1 CCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCC < 1:1781127/50‑1 CCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCC < 1:912608/50‑1 CGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCA > 1:2016593/1‑50 CGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCA < 1:6583021/50‑1 GACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAT < 1:4235666/50‑1 ACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATC < 1:6095178/50‑1 ACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATC > 1:544232/1‑50 ACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATC > 1:1133609/1‑50 TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601154‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATC > NC_000913/2614796‑2614843 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |