| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,720,634 | Δ1,442 bp | IS150‑mediated | insJ–insK | insJ, insK |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3720634 | 3722075 | 1442 | 95 [0] | [0] 93 | insJ–insK | insJ,insK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3720633 | 0 (0.000) | 93 (1.050) | 56/98 | 0.0 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 3722076 = | 0 (0.000) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta | |||||
CTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT > NC_000913/3720584‑3720681 | cTATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt > 1:336018/1‑49 (MQ=255) tataTTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaa > 1:2813126‑M1/1‑48 (MQ=255) atatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaac > 1:3205418‑M1/1‑47 (MQ=255) atatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaac > 1:4610978‑M1/1‑47 (MQ=255) atatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaac > 1:2042452‑M1/1‑47 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt < 1:561384/46‑1 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaact > 1:4315848‑M1/1‑46 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaact > 1:2642932‑M1/1‑46 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaact < 1:3852552‑M1/50‑5 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaact < 1:1357447‑M1/50‑5 (MQ=255) tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATa < 1:4979352‑M1/47‑2 (MQ=255) atTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactt > 1:6663891‑M1/1‑45 (MQ=255) tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt < 1:3479626‑M1/50‑7 (MQ=255) tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt > 1:2331515‑M1/1‑44 (MQ=255) tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt > 1:744497‑M1/1‑44 (MQ=255) tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt > 1:6222298‑M1/1‑44 (MQ=255) tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactt < 1:1763675‑M1/49‑6 (MQ=255) tCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttga > 1:2979003‑M1/1‑42 (MQ=255) gcgcaTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatt > 1:6271474‑M1/3‑39 (MQ=255) cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta > 1:6663295‑M1/2‑38 (MQ=255) cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta > 1:925636‑M1/2‑38 (MQ=255) cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta > 1:2265581‑M1/2‑38 (MQ=255) cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta < 1:3725229‑M1/49‑13 (MQ=255) cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatt < 1:753162‑M1/47‑11 (MQ=255) cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgat < 1:2758751‑M1/46‑10 (MQ=255) gCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttat < 1:5202899‑M1/50‑14 (MQ=255) gCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta > 1:3462393‑M1/1‑37 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatag > 1:3756054‑M1/1‑35 (MQ=255) aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatag < 1:2088660‑M1/50‑16 (MQ=255) ttCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt < 1:4633939‑M1/50‑17 (MQ=255) ttCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt > 1:6451194‑M1/1‑34 (MQ=255) tCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt > 1:6593903‑M1/1‑33 (MQ=255) tCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt > 1:3880221‑M1/1‑33 (MQ=255) ccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcag > 1:1497622‑M1/1‑31 (MQ=255) ccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtca < 1:3209928‑M1/49‑19 (MQ=255) aGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggt < 1:3026187‑M1/50‑22 (MQ=255) aGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggt > 1:6442734‑M1/1‑29 (MQ=255) gCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtg < 1:2648257‑M1/50‑23 (MQ=255) gCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtg > 1:5002361‑M1/1‑28 (MQ=255) cctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtgg < 1:4475976‑M1/50‑24 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg < 1:3156317‑M1/50‑25 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg < 1:3407804‑M1/50‑25 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg > 1:2018110‑M1/1‑26 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg < 1:5049006‑M1/50‑25 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg < 1:1860835‑M1/50‑25 (MQ=255) ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg > 1:1831568‑M1/1‑26 (MQ=255) tcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtgggg > 1:5758785‑M1/1‑25 (MQ=255) tcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtgggg > 1:76479‑M1/1‑25 (MQ=255) cctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggc > 1:978551‑M1/1‑24 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggct < 1:2222144‑M1/50‑28 (MQ=255) ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggct > 1:125896‑M1/1‑23 (MQ=255) tgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggctttt > 1:3345033‑M1/1‑20 (MQ=255) tgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggctttt > 1:3054881‑M1/1‑20 (MQ=255) tgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttt < 1:4114709‑M1/49‑30 (MQ=255) tgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggctt < 1:372134‑M1/48‑29 (MQ=255) ttGATTTCCAACGAGTATaactttgatttatagtcaggtgggggttttct < 1:6383030‑M1/50‑33 (MQ=255) ttGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttct < 1:1908022‑M1/50‑33 (MQ=255) ttGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttct < 1:6293701‑M1/50‑33 (MQ=255) tGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctc > 1:2954463‑M1/1‑17 (MQ=255) gATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctct > 1:407869‑M1/1‑16 (MQ=255) gATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctc < 1:5869375‑M1/49‑34 (MQ=255) aTTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctctg > 1:746069‑M1/1‑15 (MQ=255) aTTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctctg < 1:4871674‑M1/50‑36 (MQ=255) aTTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctct < 1:2035185‑M1/49‑35 (MQ=255) aTTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctct < 1:1259276‑M1/49‑35 (MQ=255) tttCCAACGAGTATaactttgatttatagtcaggtggggcttttctctgt < 1:4111819‑M1/50‑37 (MQ=255) tttCCAACGAGTATaactttgatttatagtcaggtggggcttttctctgt < 1:2556303‑M1/50‑37 (MQ=255) tCCAACGAGTATaactttgatttatagtcaggtggggcttttctctgtct > 1:6405824‑M1/1‑12 (MQ=255) tCCAACGAGTATaactttgatttatagtcaggtggggcttttctctgtct > 1:5597120‑M1/1‑12 (MQ=255) tCCAACGAGTATaactttgatttatagtcaggtggggcttttctctgtct > 1:5290685‑M1/1‑12 (MQ=255) tCCAACGAGTATaactttgatttatagtcaggtggggcttttctctgtc < 1:1034259‑M1/49‑38 (MQ=255) ccAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctg > 1:3568080‑M1/1‑11 (MQ=255) ccAACGAGTATaactttgatttatagtcaggtggggcttttctctgtct < 1:5999623‑M1/49‑39 (MQ=255) ccAACGAGTATaactttgatttatagtcaggtggggcttttctctgtct < 1:6022104‑M1/49‑39 (MQ=255) ccAACGAGTATaactttgatttatagtcaggtggggcttttctctgtct < 1:3431581‑M1/49‑39 (MQ=255) cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctgc < 1:4870685‑M1/50‑41 (MQ=255) cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctgc > 1:1627038‑M1/1‑10 (MQ=255) cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctg < 1:5002749‑M1/49‑40 (MQ=255) cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctg < 1:590390‑M1/49‑40 (MQ=255) aaCGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcc < 1:5836198‑M1/50‑42 (MQ=255) aaCGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcc < 1:4852574‑M1/50‑42 (MQ=255) aaCGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcc < 1:858458‑M1/50‑42 (MQ=255) cGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcctt > 1:1051438‑M1/1‑7 (MQ=255) cGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcctt > 1:4847273‑M1/1‑7 (MQ=255) gAGTATaactttgatttatagtcaggtggggcttttctctgtctgccttt < 1:2172313‑M1/50‑45 (MQ=255) aGTATaactttgatttatagtcaggtggggcttttctctgtctgcctttc < 1:5290459‑M1/50‑46 (MQ=255) aGTATaactttgatttatagtcaggtggggcttttctctgtctgcctttc < 1:4775617‑M1/50‑46 (MQ=255) aGTATaactttgatttatagtcaggtggggcttttctctgtctgcctttc > 1:2827524‑M1/1‑5 (MQ=255) aGTATaactttgatttatagtcaggtggggcttttctctgtctgcctttc < 1:1795887‑M1/50‑46 (MQ=255) gTATaactttgatttatagtcaggtggggcttttctctgtctgcctttcg > 1:5607127‑M1/1‑4 (MQ=255) gTATaactttgatttatagtcaggtggggcttttctctgtctgcctttcg > 1:4765873‑M1/1‑4 (MQ=255) gTATaactttgatttatagtcaggtggggcttttctctgtctgcctttcg < 1:3933434‑M1/50‑47 (MQ=255) gTATaactttgatttatagtcaggtggggcttttctctgtctgcctttcg < 1:3591514‑M1/50‑47 (MQ=255) gTATaactttgatttatagtcaggtggggcttttctctgtctgcctttcg < 1:2948384‑M1/50‑47 (MQ=255) taactttgatttatagtcaggtggggcttttctctgtctgcctttcggt > 1:6168261‑M1/1‑1 (MQ=255) | CTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT > NC_000913/3720584‑3720681 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |