| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,872,030 | Δ1,437 bp | [dgcJ] | [dgcJ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1872030 | 1873466 | 1437 | 83 [0] | [0] 81 | [dgcJ] | [dgcJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1872029 | 0 (0.000) | 79 (0.910) | 55/96 | 0.0 | 100% | intergenic (+169/‑12) | cdgI/dgcJ | putative c‑di‑GMP binding protein CdgI/putative diguanylate cyclase DgcJ |
| ? | NC_000913 | 1873467 = | 0 (0.000) | coding (1427/1491 nt) | dgcJ | putative diguanylate cyclase DgcJ | |||||
GGCTTCTCTTCCGGTATTTACGCGATGAAAGAAAACGATACGTTACATGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAA > NC_000913/1873418‑1873515 | ggccgcaatcgaactttatctggttttctcgtttcactaaccgaaggaga < 1:2402140‑M2/1‑1 (MQ=255) gccgcaatcgaactttatctggttttctcgtttcactaaccgaaggagAt > 1:40177‑M2/49‑50 (MQ=255) caatcgaactttatctggttttctcgtttcactaaccgaaggagATGCg > 1:3683136‑M2/45‑49 (MQ=255) caatcgaactttatctggttttctcgtttcactaaccgaaggagATGCg > 1:1858251‑M2/45‑49 (MQ=255) aatcgaactttatctggttttctcgtttcactaaccgaaggagATGCGta > 1:1027273‑M2/44‑50 (MQ=255) aatcgaactttatctggttttctcgtttcactaaccgaaggagATGCGta < 1:1969446‑M2/7‑1 (MQ=255) atcgaattttatctggttttctcgtttcactaaccgaaggagATGCGta > 1:5347675‑M2/43‑49 (MQ=255) atcgaactttatctggttttctcgtttcactaaccgaaggagATGCGta > 1:4948734‑M2/43‑49 (MQ=255) tcgaactttatctggttttctcgtttcactaaccgaaggagATGCGtata < 1:4431267‑M2/9‑1 (MQ=255) tcgaactttatctggttttctcgtttcactaaccgaaggagATGCGtat > 1:3739478‑M2/42‑49 (MQ=255) cgaactttatctggttttctcgtttcactaaccgaaggagATGCGtata > 1:95401‑M2/41‑49 (MQ=255) cgaactttatctggttttctcgtttcactaaccgaaggagATGCGtata > 1:1463273‑M2/41‑49 (MQ=255) gaactttatctggttttctcgtttcactaaccgaaggagATGCGtata > 1:6630942‑M2/40‑48 (MQ=255) gaactttatctggttttctcgtttcactaaccgaaggagATGCGtata > 1:5415523‑M2/40‑48 (MQ=255) gaactttatctggttttctcgtttcactaaccgaaggagATGCGtata > 1:4116855‑M2/40‑48 (MQ=255) gaactttatctggttttctcgtttcactaaccgaaggagATGCGTATaaa < 1:2621997‑M2/11‑1 (MQ=255) gaactttatctggttttctcgtttcactaaccgaaggagATGCGTATaaa < 1:2801921‑M2/11‑1 (MQ=255) gaactttatctggttttctcgtttcactaaccgaaggagATGCGTATaa < 1:5557649‑M2/10‑1 (MQ=255) aactttatctggttttctcgtttcactaaccgaaggagATGCGTATAAAg > 1:5935168‑M2/39‑50 (MQ=255) actttatctggttttctcgtttcactaaccgaaggagATGCGTATAAAGc > 1:1706460‑M2/38‑50 (MQ=255) ctttatctggttttctcgtttcactaaccgaaggagATGCGTATAAAGCt > 1:3614279‑M2/37‑50 (MQ=255) tttatctggttttctcgtttcactaaccgaaggagATGCGTATAAAGCtt > 1:3985099‑M2/36‑50 (MQ=255) ttatctggttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTc > 1:4863842‑M2/35‑50 (MQ=255) tatctggttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTcc > 1:1014901‑M2/34‑50 (MQ=255) tatctggttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTcc > 1:2581988‑M2/34‑50 (MQ=255) atctggttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTcc < 1:4291999‑M2/17‑1 (MQ=255) tctggttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCg < 1:2471218‑M2/18‑1 (MQ=255) tctggttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGa > 1:2178965‑M2/32‑50 (MQ=255) ctggttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGAt > 1:938651‑M2/31‑50 (MQ=255) gttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATg < 1:4570793‑M2/21‑1 (MQ=255) gttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGa < 1:2887339‑M2/22‑1 (MQ=255) gttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGa < 1:718476‑M2/22‑1 (MQ=255) gttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGa < 1:4656272‑M2/22‑1 (MQ=255) gttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAg < 1:73072‑M2/23‑1 (MQ=255) gttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAg < 1:271135‑M2/23‑1 (MQ=255) ttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGc < 1:6194448‑M2/24‑1 (MQ=255) ttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGc < 1:1608077‑M2/24‑1 (MQ=255) ttttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGc > 1:4811111‑M2/27‑50 (MQ=255) tttctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCg > 1:2043729‑M2/26‑50 (MQ=255) tctcgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGt < 1:136643‑M2/26‑1 (MQ=255) cgtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTta > 1:3795901‑M2/21‑49 (MQ=255) gtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGttt < 1:2612803‑M2/28‑1 (MQ=255) gtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGttt < 1:3710113‑M2/28‑1 (MQ=255) gtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTtata > 1:4075315‑M2/20‑50 (MQ=255) gtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTtata > 1:2125748‑M2/20‑50 (MQ=255) gtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTtat < 1:3449298‑M2/30‑1 (MQ=255) gtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTtat < 1:1369489‑M2/30‑1 (MQ=255) gtttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTta < 1:4400672‑M2/29‑1 (MQ=255) tttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTatat > 1:3035447‑M2/19‑50 (MQ=255) tttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTatat > 1:4064018‑M2/19‑50 (MQ=255) ttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATg > 1:6740898‑M2/18‑50 (MQ=255) ttcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATg > 1:6556834‑M2/18‑50 (MQ=255) tcactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATg < 1:6390497‑M2/33‑1 (MQ=255) cactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGt < 1:286889‑M2/34‑1 (MQ=255) cactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGt < 1:6521258‑M2/34‑1 (MQ=255) cactaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGt < 1:4909995‑M2/34‑1 (MQ=255) actaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTc > 1:3453353‑M2/15‑49 (MQ=255) actaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCa < 1:4098317‑M2/36‑1 (MQ=255) actaaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCa < 1:3947494‑M2/36‑1 (MQ=255) taaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCaa > 1:1218123‑M2/13‑49 (MQ=255) aaccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAAt > 1:3091066‑M2/12‑49 (MQ=255) accgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAAt < 1:4752950‑M2/38‑1 (MQ=255) accgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATa < 1:6060904‑M2/39‑1 (MQ=255) ccgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAg > 1:6739573‑M2/10‑50 (MQ=255) cgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAg > 1:3391561‑M2/9‑49 (MQ=255) cgaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGc < 1:1164471‑M2/42‑1 (MQ=255) gaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAg > 1:6644627‑M2/8‑48 (MQ=255) gaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAg > 1:3036669‑M2/8‑48 (MQ=255) gaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAg > 1:4912758‑M2/8‑48 (MQ=255) gaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAg > 1:3462864‑M2/8‑48 (MQ=255) gaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCa < 1:4258008‑M2/43‑1 (MQ=255) gaaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCa < 1:415582‑M2/43‑1 (MQ=255) aaggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAg > 1:6241465‑M2/7‑47 (MQ=255) aggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAg > 1:2984046‑M2/6‑49 (MQ=255) aggagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGa < 1:5652472‑M2/45‑1 (MQ=255) gagATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAAc < 1:309868‑M2/47‑1 (MQ=255) agATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAAc > 1:2313239‑M2/3‑49 (MQ=255) agATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAAc > 1:1193271‑M2/3‑49 (MQ=255) agATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACa < 1:4843301‑M2/48‑1 (MQ=255) gATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACaa < 1:2958527‑M2/49‑1 (MQ=255) gATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACa > 1:4772979‑M2/2‑49 (MQ=255) | GGCTTCTCTTCCGGTATTTACGCGATGAAAGAAAACGATACGTTACATGATGCGTATAAAGCTTCCGATGAGCGTTTATATGTCAATAAGCAGAACAA > NC_000913/1873418‑1873515 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |