| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,509,631 | Δ8,319 bp | [yfeO]–pdeA | [yfeO], ypeC, mntH, nupC, insL‑3, pdeA | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2509631 | 2517949 | 8319 | 80 [0] | [0] 75 | [yfeO]–pdeA | [yfeO],ypeC,mntH,nupC,insL‑3,pdeA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2509630 | 0 (0.000) | 74 (0.830) | 51/98 | 0.0 | 100% | coding (1/1257 nt) | yfeO | putative transport protein YfeO |
| ? | NC_000913 | 2517950 = | 0 (0.000) | intergenic (‑118/+91) | pdeA/alaX | putative c‑di‑GMP phosphodiesterase PdeA/tRNA‑Ala | |||||
AACAGGGGGCCAGCCTGTTGCCGATTTTTCATCCAATGATGCTTTCACCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAGC > NC_000913/2517902‑2517999 | tgcaagctgggcaaactaagtatctgaccccgcataaggaatagaacac < 1:4076988‑M2/1‑1 (MQ=255) agctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcg < 1:4235808‑M2/6‑1 (MQ=255) agctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcg > 1:3272818‑M2/45‑50 (MQ=255) ctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcgg > 1:1808471‑M2/43‑49 (MQ=255) gcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACt > 1:6291621‑M2/39‑49 (MQ=255) gcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACt > 1:3616802‑M2/39‑49 (MQ=255) gcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACt > 1:157225‑M2/39‑49 (MQ=255) gcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACt > 1:6405932‑M2/39‑49 (MQ=255) gcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTa < 1:2204554‑M2/12‑1 (MQ=255) gcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTa < 1:2143114‑M2/12‑1 (MQ=255) caaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTaa > 1:6469691‑M2/38‑50 (MQ=255) caaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTaa < 1:4086283‑M2/13‑1 (MQ=255) caaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTaa > 1:6667472‑M2/38‑50 (MQ=255) aaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAc > 1:2752180‑M2/37‑50 (MQ=255) aaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAc < 1:320939‑M2/14‑1 (MQ=255) aactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAcc > 1:4018175‑M2/36‑50 (MQ=255) actaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAccc < 1:6734236‑M2/16‑1 (MQ=255) actaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAccc > 1:830450‑M2/35‑50 (MQ=255) actaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAccc < 1:4547497‑M2/16‑1 (MQ=255) actaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAccc > 1:2685215‑M2/35‑50 (MQ=255) ctaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAaccct > 1:3576074‑M2/34‑49 (MQ=255) ctaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCg < 1:1357173‑M2/17‑1 (MQ=255) taagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCg > 1:575479‑M2/33‑49 (MQ=255) taagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCg > 1:2732988‑M2/33‑49 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCgg < 1:3823106‑M2/18‑1 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGa < 1:6598098‑M2/19‑1 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGAc < 1:4095547‑M2/20‑1 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGAc < 1:355973‑M2/20‑1 (MQ=255) agtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGAc < 1:1965174‑M2/20‑1 (MQ=255) gtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACg > 1:6560395‑M2/30‑50 (MQ=255) tatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACg > 1:5651959‑M2/29‑49 (MQ=255) tatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACg > 1:3622358‑M2/29‑49 (MQ=255) atctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACg > 1:428075‑M2/28‑48 (MQ=255) atctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACg > 1:4183629‑M2/28‑48 (MQ=255) tctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACg > 1:1643231‑M2/27‑47 (MQ=255) tctgaccccgcataaggaatagaacaCAGGCGGCACGAACCCGGACGTa < 1:5308958‑M2/23‑1 (MQ=255) tgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGAc > 1:1622897‑M2/25‑50 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAg < 1:2192495‑M2/24‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGAc < 1:5305913‑M2/26‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTg > 1:1334420‑M2/23‑50 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTg > 1:4598731‑M2/23‑50 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTg < 1:1974920‑M2/28‑1 (MQ=255) ccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTg > 1:5720305‑M2/22‑49 (MQ=255) ccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGt < 1:5979675‑M2/29‑1 (MQ=255) cccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTa > 1:5957093‑M2/21‑50 (MQ=255) cccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTa > 1:2845880‑M2/21‑50 (MQ=255) cccgaataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTa > 1:3006419‑M2/21‑50 (MQ=255) cccacataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTa < 1:6083478‑M2/30‑1 (MQ=255) ccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt > 1:6411348‑M2/20‑50 (MQ=255) ccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt < 1:324115‑M2/31‑1 (MQ=255) ccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt < 1:2037325‑M2/31‑1 (MQ=255) ccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt < 1:689067‑M2/31‑1 (MQ=255) ccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt > 1:1258334‑M2/20‑50 (MQ=255) cgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAtt < 1:914906‑M2/32‑1 (MQ=255) cgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt > 1:5136435‑M2/19‑49 (MQ=255) cgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt > 1:4767975‑M2/19‑49 (MQ=255) gcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTa < 1:1568528‑M2/33‑1 (MQ=255) cataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTAc < 1:1436825‑M2/34‑1 (MQ=255) cataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTAc < 1:6209306‑M2/34‑1 (MQ=255) ataaggaatagaacaCAGGCGGCGCTAACCCGGACGTAGACTGTATTACa < 1:303490‑M2/35‑1 (MQ=255) ataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACa < 1:2345500‑M2/35‑1 (MQ=255) taaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACa > 1:1234047‑M2/15‑49 (MQ=255) aaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaa > 1:1825962‑M2/14‑49 (MQ=255) aggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaa > 1:5661421‑M2/13‑48 (MQ=255) aggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaa > 1:877946‑M2/13‑48 (MQ=255) ggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAg > 1:5843051‑M2/12‑50 (MQ=255) ggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAg < 1:1084841‑M2/39‑1 (MQ=255) aatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCg < 1:94627‑M2/41‑1 (MQ=255) atagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCgg > 1:232667‑M2/9‑50 (MQ=255) gaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaa < 1:2667453‑M2/45‑1 (MQ=255) aacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaaa < 1:487746‑M2/46‑1 (MQ=255) aacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaa > 1:2006075‑M2/5‑49 (MQ=255) acaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaaa > 1:6662226‑M2/4‑49 (MQ=255) caCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCaaaaa < 1:2968477‑M2/48‑1 (MQ=255) cAGTCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAGc < 1:2288185/50‑1 (MQ=255) | AACAGGGGGCCAGCCTGTTGCCGATTTTTCATCCAATGATGCTTTCACCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAGC > NC_000913/2517902‑2517999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |