Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,581,139 3915 bp→CAAATG [yhhY]yrhB [yhhY], yhhZ, yrhA, insA‑6, insB‑6, yrhA, yrhD, yrhB

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3581139 3585053 3915 109 [0] [0] 94 [yhhY]–yrhB [yhhY],yhhZ,yrhA,insA‑6,insB‑6,yrhA,yrhD,yrhB

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 35811380 (0.000)88 (1.130)
+CAAATG
52/86 0.0 100% coding (1/489 nt) yhhY N‑acetyltransferase YhhY
?NC_000913 3585054 = 0 (0.000)intergenic (+11/+27) yrhB/ggt putative heat shock chaperone/glutathione hydrolase proenzyme

GATTACGAAATAAAAAAGGCTACCTTCGGCTTGCCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCA  >  NC_000913/3585005‑3585102
                                                 |                                                
aatgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgc                                                  >  1:2235431‑M2/50‑50 (MQ=255)
  tgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgctc                                                >  1:1929917‑M2/48‑50 (MQ=255)
   gatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgctct                                               >  1:1480267‑M2/47‑50 (MQ=255)
    atgttgaaagggacatttaccccaaagaggacaaaggaacaaatgctct                                               <  1:571722‑M2/4‑1 (MQ=255)
    atgttgaaagggacatttaccccaaagaggacaaaggaacaaatgctct                                               <  1:6181732‑M2/4‑1 (MQ=255)
    atgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCtt                                              >  1:517586‑M2/46‑50 (MQ=255)
    atgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCtt                                              <  1:2664518‑M2/5‑1 (MQ=255)
     tgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTc                                             <  1:2140484‑M2/6‑1 (MQ=255)
     tgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTc                                             <  1:5263509‑M2/6‑1 (MQ=255)
     tgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTc                                             >  1:1398911‑M2/45‑50 (MQ=255)
      gttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc                                            >  1:1455945‑M2/44‑50 (MQ=255)
       ttgaaagggacatttgccccaaagaggacaaaggaacaaatgCTCTTccc                                           <  1:2014854‑M2/8‑1 (MQ=255)
       ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTccc                                           <  1:2481066‑M2/8‑1 (MQ=255)
       ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTccc                                           <  1:2463067‑M2/8‑1 (MQ=255)
       ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc                                            >  1:1028808‑M2/43‑49 (MQ=255)
       ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc                                            <  1:2744449‑M2/7‑1 (MQ=255)
       ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc                                            <  1:3066504‑M2/7‑1 (MQ=255)
       ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc                                            <  1:3579059‑M2/7‑1 (MQ=255)
       ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc                                            <  1:4749317‑M2/7‑1 (MQ=255)
       ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc                                            <  1:4348824‑M2/7‑1 (MQ=255)
       ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc                                            >  1:947246‑M2/43‑49 (MQ=255)
        tgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCa                                          >  1:5875756‑M2/42‑50 (MQ=255)
        tgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCa                                          >  1:3101851‑M2/42‑50 (MQ=255)
         gaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCa                                          <  1:1977831‑M2/9‑1 (MQ=255)
         gaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCa                                          <  1:5975193‑M2/9‑1 (MQ=255)
         gaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCAc                                         >  1:164438‑M2/41‑50 (MQ=255)
          aaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCAc                                         >  1:5803232‑M2/40‑49 (MQ=255)
          aaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCAc                                         >  1:5373138‑M2/40‑49 (MQ=255)
          aaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCAc                                         <  1:1505820‑M2/10‑1 (MQ=255)
          aaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCAc                                         >  1:136015‑M2/40‑49 (MQ=255)
          aaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCAc                                         <  1:653805‑M2/10‑1 (MQ=255)
           aagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACg                                        >  1:5147930‑M2/39‑49 (MQ=255)
           aagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACg                                        >  1:4799349‑M2/39‑49 (MQ=255)
           aagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACg                                        >  1:4124623‑M2/39‑49 (MQ=255)
            agggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACg                                        >  1:6665523‑M2/38‑48 (MQ=255)
            agggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACg                                        >  1:3461849‑M2/38‑48 (MQ=255)
            agggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACg                                        >  1:4269238‑M2/38‑48 (MQ=255)
            agggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGaa                                      <  1:945039‑M2/13‑1 (MQ=255)
             gggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACg                                        >  1:4368896‑M2/37‑47 (MQ=255)
              ggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGaa                                      >  1:5291348‑M2/36‑48 (MQ=255)
              ggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGaa                                      >  1:3926523‑M2/36‑48 (MQ=255)
              ggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAaga                                    <  1:5392388‑M2/15‑1 (MQ=255)
               gacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAagag                                   <  1:855738‑M2/16‑1 (MQ=255)
               gacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAagag                                   <  1:2614770‑M2/16‑1 (MQ=255)
                acatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAgg                                  <  1:4995373‑M2/17‑1 (MQ=255)
                acatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAgg                                  <  1:4403527‑M2/17‑1 (MQ=255)
                 catttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAggg                                 >  1:3207350‑M2/33‑50 (MQ=255)
                 catttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAggg                                 <  1:5437852‑M2/18‑1 (MQ=255)
                 catttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAggg                                 >  1:3903821‑M2/33‑50 (MQ=255)
                  atttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGc                                >  1:1089555‑M2/32‑50 (MQ=255)
                     taccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCg                              <  1:1058252‑M2/21‑1 (MQ=255)
                     taccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCg                              <  1:1639118‑M2/21‑1 (MQ=255)
                      accccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGc                             >  1:1332632‑M2/28‑49 (MQ=255)
                      accccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGc                             >  1:5562367‑M2/28‑49 (MQ=255)
                        cccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTaa                          <  1:3928015‑M2/25‑1 (MQ=255)
                        cccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTaa                          <  1:503971‑M2/25‑1 (MQ=255)
                         ccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAAc                         <  1:1327869‑M2/26‑1 (MQ=255)
                         ccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAAc                         <  1:5824998‑M2/26‑1 (MQ=255)
                          caaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAAcc                        >  1:748255‑M2/24‑50 (MQ=255)
                          caaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAAcc                        >  1:2867393‑M2/24‑50 (MQ=255)
                           aaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                       >  1:4988377‑M2/23‑50 (MQ=255)
                            aagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCtt                      <  1:1108547‑M2/29‑1 (MQ=255)
                            aagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                       >  1:3139146‑M2/22‑49 (MQ=255)
                            aagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                       >  1:2892799‑M2/22‑49 (MQ=255)
                            aagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                       >  1:5333289‑M2/22‑49 (MQ=255)
                             agaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                       >  1:4191857‑M2/21‑48 (MQ=255)
                             agaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                       >  1:990304‑M2/21‑48 (MQ=255)
                             agaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTa                     <  1:6578274‑M2/30‑1 (MQ=255)
                             agaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTa                     <  1:1106881‑M2/30‑1 (MQ=255)
                               aggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGt                   <  1:3494232‑M2/32‑1 (MQ=255)
                                ggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTa                  >  1:5396859‑M2/18‑50 (MQ=255)
                                  acaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcc                <  1:2393002‑M2/35‑1 (MQ=255)
                                  acaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcc                >  1:1319833‑M2/16‑50 (MQ=255)
                                  acaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcc                >  1:5391869‑M2/16‑50 (MQ=255)
                                   caaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAccc               >  1:1784592‑M2/15‑50 (MQ=255)
                                   caaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAccc               <  1:1314650‑M2/36‑1 (MQ=255)
                                    aaaggaacaaatgCTCTTCCCACGAAGAGTGCCGCTAACCTTAGTAcc                >  1:6297000‑M2/14‑48 (MQ=255)
                                    aaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcccc              <  1:934219‑M2/37‑1 (MQ=255)
                                    aaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcccc              >  1:2860179‑M2/14‑50 (MQ=255)
                                    aaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcccc              >  1:1204134‑M2/14‑50 (MQ=255)
                                      aggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgc            >  1:1780136‑M2/12‑50 (MQ=255)
                                      aggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgc            <  1:4529541‑M2/39‑1 (MQ=255)
                                       ggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgcc           >  1:6651028‑M2/11‑50 (MQ=255)
                                       ggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgcc           >  1:5387566‑M2/11‑50 (MQ=255)
                                        gaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccgccg          <  1:2304799‑M2/41‑1 (MQ=255)
                                         aacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGt         >  1:4011119‑M2/9‑50 (MQ=255)
                                          acaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGt         >  1:4563915‑M2/8‑49 (MQ=255)
                                          acaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGt         >  1:4467271‑M2/8‑49 (MQ=255)
                                           caaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGtt        >  1:6441297‑M2/7‑49 (MQ=255)
                                            aaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTa       >  1:5439037‑M2/6‑49 (MQ=255)
                                              atgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAAt    >  1:763441‑M2/4‑50 (MQ=255)
                                              atgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAAt    >  1:3506337‑M2/4‑50 (MQ=255)
                                               tgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAAt    >  1:4346989‑M2/3‑49 (MQ=255)
                                                gCTCTTCCCACGAAGATGGCCGCTAACCTTAGTACCCCGCCGTTAAATCa  >  1:1522073‑M2/2‑50 (MQ=255)
                                                 |                                                
GATTACGAAATAAAAAAGGCTACCTTCGGCTTGCCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAATCA  >  NC_000913/3585005‑3585102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: