| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 73 [0] | [0] 73 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 72 (1.080) | 51/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > NC_000913/173448‑173495 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT > 1:4380394/1‑50TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:4513801/50‑1TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT > 1:4520112/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:890808/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:1073544/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT < 1:4879365/49‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT < 1:1915474/49‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 1:1858626/50‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:2794794/1‑49 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:2568525/50‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:2864311/1‑49 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA < 1:4508887/49‑1 TCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA > 1:3620578/1‑50 CGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC > 1:851176/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 1:3460935/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 1:4192805/49‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:1150832/50‑1 TACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC > 1:1575025/1‑50 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC > 1:1265461/1‑50 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC > 1:3423033/1‑50 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:3686363/50‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:114482/50‑1 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:2379992/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:466480/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG < 1:4894003/50‑1 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:1141673/1‑49 TATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA > 1:3129387/1‑50 TATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA > 1:3398670/1‑50 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC > 1:3976530/1‑50 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:3448972/49‑1 ATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA < 1:5125653/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG > 1:1459341/1‑50 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:767399/49‑1 CATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC > 1:4535175/1‑50 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC < 1:1952016/49‑1 TTCGCTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:2593999/50‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:3393122/50‑1 CACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG < 1:4429461/49‑1 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:1270206/1‑50 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGG < 1:2853277/49‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC < 1:2932867/50‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC < 1:542421/50‑1 TTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:4912453/1‑50 TTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:4915067/1‑49 TTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:3706725/1‑49 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:4154397/1‑50 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG < 1:2068988/48‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:3930711/1‑49 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:91088/1‑49 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT > 1:3718129/1‑49 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:4557451/1‑49 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:2467423/1‑49 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 1:3587750/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 1:2100435/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTAAGCCTGGACGGATAAA < 1:2839826/50‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC < 1:3093981/50‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG < 1:3706755/49‑1 GAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCG > 1:742170/1‑50 GAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCG > 1:713048/1‑50 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:2825651/1‑50 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:2764342/1‑50 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:4943882/1‑50 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:4173526/1‑50 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:4892585/1‑50 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:3773685/1‑49 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA < 1:4973012/50‑1 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA > 1:335245/1‑50 ATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC > 1:4827722/1‑50 ATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC > 1:974464/1‑50 ACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:214737/1‑50 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG < 1:792458/50‑1 CATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA < 1:668639/50‑1 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > NC_000913/173448‑173495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |