| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 55 [0] | [0] 57 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 55 (0.820) | 42/98 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
CTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675505‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAG > NC_000913/683371‑683418 CTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG > 1:4491318/1‑50CTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG > 1:4700791/1‑50 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG < 1:531065/48‑1 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG < 1:3649125/48‑1 CGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGT < 1:1906549/49‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC < 1:941470/50‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTT < 1:2847392/49‑1 CACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT > 1:1638753/1‑50 ACAGCAATAAAGCGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG > 1:3493672/1‑50 CAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG > 1:5043385/1‑49 AGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCA < 1:3008093/50‑1 GCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT > 1:4858553/1‑50 CAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT > 1:4951341/1‑49 AATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTA < 1:1540478/50‑1 AATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTA > 1:435634/1‑50 ATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTAT < 1:599303/50‑1 ATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTAT < 1:4989493/50‑1 TAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATC < 1:325339/50‑1 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCA > 1:430295/1‑50 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCA > 1:2073698/1‑50 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCA < 1:1617389/50‑1 AGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCAT < 1:956676/50‑1 GAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATT < 1:1004915/50‑1 AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG < 1:3584483/50‑1 AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG < 1:1528714/50‑1 GAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGC < 1:1376808/50‑1 GAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG > 1:1288286/1‑49 AATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCA > 1:2964025/1‑50 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT < 1:4779279/50‑1 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA < 1:4689775/50‑1 GGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA > 1:870620/1‑49 GGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATA > 1:4966986/1‑50 GGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTAT < 1:2262279/49‑1 GGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTAT < 1:2152733/49‑1 GCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATAT > 1:965661/1‑50 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATC < 1:3439182/50‑1 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA < 1:1216255/50‑1 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA < 1:1678915/50‑1 TGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAA < 1:4807820/50‑1 TGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA > 1:4506219/1‑49 TGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA > 1:1350124/1‑49 TGAAATTCCCATGGCGAGTTCTGCACTATCCATTGCATTTATATCTTGA > 1:4438399/1‑49 GAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA > 1:4224768/1‑48 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAA < 1:3593829/49‑1 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAA < 1:2253631/49‑1 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA > 1:2393106/1‑47 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGA < 1:477480/50‑1 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGA < 1:3743481/50‑1 TTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA < 1:2999718/50‑1 TTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA < 1:797611/50‑1 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAA < 1:4662406/49‑1 CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAG < 1:5086948/50‑1 CCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA < 1:46229/49‑1 CATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA > 1:1624962/1‑48 CATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA > 1:3134662/1‑48 CTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675505‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAG > NC_000913/683371‑683418 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |