| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,165,151 | Δ12,060 bp | yegP–gatY | 17 genes yegP, yegQ, cyaR, ogrK, yegZ, yegR, yegS, gatR, insE‑5, insF‑5, gatR, gatD, gatC, gatB, gatA, gatZ, gatY |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2165151 | 2177210 | 12060 | 67 [0] | [0] 68 | yegP–gatY | yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2165150 | 0 (0.000) | 67 (1.000) | 49/98 | 0.0 | 100% | intergenic (+152/‑39) | baeR/yegP | DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP |
| ? | NC_000913 | 2177211 = | 0 (0.000) | intergenic (‑7/+301) | gatY/fbaB | tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I | |||||
AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165102‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT > NC_000913/2177211‑2177259 AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAA < 1:518883/50‑1 GCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATC > 1:1110106/1‑50 ATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCT > 1:2590618/1‑50 AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGT < 1:3081020/49‑1 GAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCG > 1:870414/1‑50 AAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTT < 1:3104945/50‑1 AAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTT < 1:230995/50‑1 AATCGCTTATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTT < 1:3398840/50‑1 AATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTT < 1:1254042/50‑1 AATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTT < 1:4711080/50‑1 AATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTT < 1:2733499/50‑1 ATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTG > 1:2832902/1‑50 ATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTG < 1:3312042/50‑1 TCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGT > 1:4336399/1‑50 TCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGT < 1:1454411/50‑1 TCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGT < 1:3124087/50‑1 GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTT < 1:595374/50‑1 CTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT < 1:5193/50‑1 CTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT < 1:197219/50‑1 CTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTT < 1:4825795/50‑1 TCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC > 1:1332679/1‑50 CATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC > 1:2440022/1‑49 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA < 1:436279/50‑1 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC < 1:4119303/48‑1 TACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGAT > 1:1751888/1‑50 TACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGAT < 1:3772/50‑1 ACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATT > 1:105062/1‑50 CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATT < 1:592607/49‑1 TTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTT > 1:4673649/1‑49 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTC < 1:2724215/48‑1 TAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTC < 1:1410738/48‑1 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA > 1:464235/1‑49 AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA < 1:2367071/49‑1 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA < 1:1867069/50‑1 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAA < 1:3599957/49‑1 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAA < 1:1910756/49‑1 ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAA < 1:4455167/49‑1 TCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAAT < 1:1131701/50‑1 TCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAA > 1:2587119/1‑49 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT < 1:695075/50‑1 GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATA < 1:2472321/49‑1 GTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT > 1:3681661/1‑49 TAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAA < 1:4273285/50‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATG < 1:1109895/50‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATG < 1:3422662/50‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT > 1:916221/1‑49 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT > 1:790357/1‑49 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT < 1:2788543/49‑1 AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT > 1:3283046/1‑49 ACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATG > 1:957098/1‑49 AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAA > 1:1305163/1‑50 AGCACCTTTAGAATCCAGACGTTTATTTTCGATTTCAAAATATAATGAAA < 1:2566364/50‑1 GCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT > 1:4087520/1‑50 CACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT > 1:3291015/1‑49 ACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTA < 1:1908066/50‑1 ACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTA < 1:138501/50‑1 CCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAT < 1:2225831/50‑1 CCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTAT < 1:399235/50‑1 TTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT > 1:1685998/1‑50 TTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTG > 1:3781538/1‑50 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGT > 1:4664523/1‑50 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT < 1:3292467/48‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT < 1:3348961/48‑1 TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT < 1:1983078/48‑1 AGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGT < 1:3378813/49‑1 AATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT < 1:155710/50‑1 AATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT < 1:1300686/50‑1 AGGCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2165102‑2165150‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT > NC_000913/2177211‑2177259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |