| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,509,631 | Δ8,319 bp | [yfeO]–pdeA | [yfeO], ypeC, mntH, nupC, insL‑3, pdeA | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2509631 | 2517949 | 8319 | 59 [0] | [0] 58 | [yfeO]–pdeA | [yfeO],ypeC,mntH,nupC,insL‑3,pdeA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2509630 | 0 (0.000) | 58 (0.870) | 42/98 | 0.0 | 100% | coding (1/1257 nt) | yfeO | putative transport protein YfeO |
| ? | NC_000913 | 2517950 = | 0 (0.000) | intergenic (‑118/+91) | pdeA/alaX | putative c‑di‑GMP phosphodiesterase PdeA/tRNA‑Ala | |||||
TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2509583‑2509630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > NC_000913/2517950‑2517998 TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAC < 1:3154763/49‑1 GCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAG > 1:5051504/1‑50 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGG < 1:2114259/50‑1 AAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGC < 1:2008839/50‑1 AGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCG > 1:2114865/1‑50 AGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCG < 1:1865284/50‑1 GCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTA < 1:371788/50‑1 CAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAA > 1:2715513/1‑50 AACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACC < 1:4749687/50‑1 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCC > 1:920097/1‑50 CTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCG < 1:1273036/50‑1 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGAC > 1:1221420/1‑50 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGAC < 1:3305989/50‑1 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGAC > 1:2176219/1‑50 GTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 1:2914765/1‑50 TATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGT < 1:3818110/50‑1 TATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 1:530618/1‑49 TATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 1:3932207/1‑49 TCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTA < 1:244595/49‑1 TCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 1:3531970/1‑47 TGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGAC > 1:2333463/1‑50 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACT < 1:1665970/49‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGAC < 1:711577/48‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGAC < 1:2573556/48‑1 CCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTAT < 1:5035734/50‑1 GCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA < 1:833445/50‑1 GCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA < 1:2479531/50‑1 CATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTAC < 1:5113286/50‑1 CATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTAC < 1:3459362/50‑1 CATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTAC < 1:2036994/50‑1 CATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA > 1:828557/1‑49 CATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA > 1:608942/1‑49 CATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA > 1:3015006/1‑49 CATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA > 1:2172194/1‑49 ATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACA < 1:4716810/50‑1 AAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAA > 1:3133569/1‑49 AGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAA < 1:1459849/50‑1 AGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAA < 1:744534/49‑1 AGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAA < 1:5042511/49‑1 AGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAA > 1:1959262/1‑48 GGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAG > 1:2622433/1‑50 GGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAG > 1:1463106/1‑50 GAATAGAACACAGGCGGCACTAACCCTGACGTAGCCTGTATTACAACAGC > 1:2606176/1‑50 GAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGC > 1:1507007/1‑50 GAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGC < 1:1756087/50‑1 GAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGC < 1:4776111/50‑1 AATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCG < 1:1942799/50‑1 ATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGG > 1:2830615/1‑50 ATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGG > 1:1604899/1‑50 TAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGG > 1:3030681/1‑49 AGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGC > 1:4771032/1‑49 GAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCA > 1:2343524/1‑49 AACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAA > 1:3201626/1‑49 ACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAA > 1:3720911/1‑49 ACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAA > 1:89884/1‑49 CACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAA > 1:2325855/1‑48 CACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAA > 1:4004950/1‑48 ACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > 1:3505330/1‑50 TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2509583‑2509630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > NC_000913/2517950‑2517998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |