| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2558699 | 2565488 | 6790 | 59 [0] | [0] 58 | intZ–[eutA] | intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2558698 | 0 (0.000) | 48 (0.860) | 37/82 | 0.0 | 100% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/CPZ‑55 prophage; putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 0 (0.000) | coding (1396/1404 nt) | eutA | reactivating factor for ethanolamine ammonia‑lyase EutBC | |||||
ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2558644‑2558698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAG > NC_000913/2565489‑2565537 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCA < 1:2228221/50‑1ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCA < 1:5058765/50‑1ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCA < 1:899443/50‑1 TATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAG < 1:3929977/50‑1 TATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAG > 1:2648748/1‑50 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGG < 1:314989/49‑1 TACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGG < 1:4771309/49‑1 ACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGG > 1:1319744/1‑48 ATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG > 1:2143430/1‑49 CCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAAT < 1:3911948/50‑1 CCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAAT < 1:2274383/50‑1 CCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAA < 1:3738243/49‑1 CGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATG > 1:2514280/1‑50 CGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATG > 1:2066219/1‑50 CGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATG < 1:1264425/50‑1 AACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGC > 1:2448883/1‑49 AACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGC > 1:4723464/1‑49 ACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGA < 1:2613620/50‑1 CAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAG < 1:867790/50‑1 CAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAG > 1:2393788/1‑50 AATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGT < 1:3914029/50‑1 ATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGT > 1:2146053/1‑49 ATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGT > 1:2565953/1‑49 GTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGAT > 1:1453904/1‑50 TGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGAT < 1:3832558/49‑1 TGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGAT < 1:2593464/49‑1 GTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTC < 1:661742/50‑1 GTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTT < 1:1755969/49‑1 GTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTT > 1:3477686/1‑49 TCTTTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCA < 1:3516007/50‑1 TTAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCG > 1:808143/1‑50 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCAC < 1:2624887/47‑1 TAGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCAC < 1:1062289/47‑1 AGTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGT > 1:4179377/1‑49 GTTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCA < 1:3060969/50‑1 TTTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCAC < 1:3375148/50‑1 TTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACC > 1:4459999/1‑50 TTCATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACC > 1:1213420/1‑50 CATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGG > 1:3325795/1‑50 CATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCG < 1:2152146/49‑1 ATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGG > 1:3079414/1‑49 ATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGG > 1:4837088/1‑49 ATAAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGG > 1:3683264/1‑49 AAGTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCA > 1:2735846/1‑49 GTCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAA > 1:1913203/1‑50 TCGTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAAC > 1:5019419/1‑50 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCG < 1:681236/50‑1 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC < 1:1726128/49‑1 GTTCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACC > 1:1071665/1‑49 TCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGAT > 1:410857/1‑50 TCCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGAT > 1:1684042/1‑50 CCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATC > 1:3695535/1‑50 CCCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGAT < 1:4761473/49‑1 CCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCC > 1:36294/1‑50 CCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCC < 1:5010645/50‑1 CCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCC < 1:658915/50‑1 CCTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATC < 1:2774415/49‑1 CAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGC > 1:1256253/1‑49 GAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAA > 1:1953868/1‑49 AAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAA < 1:2224158/50‑1 AAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAA < 1:967657/50‑1 AAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:99322/1‑49 AAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:225003/1‑49 AGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:2978077/1‑48 GGAAATGCGATTGATTTCCCCGTCACCGGCACAACCGATCCGCCAAAAAG < 1:1548222/50‑1 GGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAG < 1:1682634/50‑1 GGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:129165/1‑47 ATATACATTGCCGAACAATGTGGTCTTTAGTTTCATAAGTCGTTCCCTCAGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2558644‑2558698‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAG > NC_000913/2565489‑2565537 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |