| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 76 [0] | [0] 76 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 70 (1.090) | 49/94 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA > 1:2592954/1‑49 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT > 1:3131135/1‑50 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT < 1:1677098/50‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:320853/50‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:2227958/1‑50 AATTGAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:780780/50‑1 ATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTG < 1:4561246/50‑1 ATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTG < 1:246513/50‑1 ATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:1800005/1‑49 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGA < 1:1119954/50‑1 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGA > 1:798363/1‑50 TTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:506041/1‑50 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT < 1:2786678/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:2040072/1‑50 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:4555089/50‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:1244459/1‑50 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:2848761/50‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:2157500/50‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:2807831/50‑1 TTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCAC > 1:570642/1‑50 TAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT > 1:4461212/1‑50 TAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT > 1:3839875/1‑50 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 1:4044987/1‑50 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT < 1:530116/49‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGC < 1:168790/46‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:94380/49‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:3817548/49‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 1:2484946/1‑49 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:4307751/1‑50 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATA < 1:11037/50‑1 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT > 1:5018502/1‑49 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA < 1:2717331/49‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:3732165/1‑49 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:4595045/1‑49 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:3569513/1‑49 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:2921336/50‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:1237046/50‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:3707992/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:2135982/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:1285608/1‑50 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT < 1:2572210/50‑1 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGA < 1:3064694/50‑1 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG > 1:615905/1‑49 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG > 1:4958236/1‑49 ATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG > 1:529381/1‑49 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:979619/1‑50 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:4176134/1‑50 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:2512333/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:299580/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:266497/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:3159116/50‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:2513582/50‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA > 1:3353072/1‑49 GAATAAGGAAGTTTATATTGATTATTAGCACTTTATAATCATTGAATAA > 1:5096071/1‑49 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA < 1:503250/50‑1 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:2938111/1‑50 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAAT < 1:1422504/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAAT < 1:5084449/50‑1 AAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:3936102/1‑48 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAG < 1:3606641/50‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATA < 1:2081832/49‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATA < 1:4074659/49‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATA < 1:3952180/49‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:1151137/1‑47 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAT < 1:514181/50‑1 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAT < 1:234108/50‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT < 1:4766111/50‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:354125/1‑50 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT > 1:74723/1‑50 TTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT > 1:4606063/1‑50 TTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT > 1:380536/1‑50 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:3358461/1‑49 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG < 1:1549305/49‑1 ATATTGATTATTAGCACTTTATAATCAATGAATAAAAATAGATTTTATG < 1:4571959/49‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > 1:1930331/1‑50 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT < 1:4570101/49‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT < 1:4041299/49‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |