| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 332,366 | Δ44,951 bp | pdeL–yaiL | 39 genes pdeL, yahB, yahC, yahD, yahE, yahF, yahG, yahH, yahI, yahJ, yahK, yahL, yahM, yahN, yahO, prpR, prpB, prpC, prpD, prpE, codB, codA, cynR, cynT, cynS, cynX, lacA, lacY, lacZ, lacI, mhpR, mhpA, mhpB, mhpC, mhpD, mhpF, mhpE, mhpT, yaiL |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 332366 | 377316 | 44951 | 133 [0] | [0] 131 | pdeL–yaiL | pdeL,yahB,yahC,yahD,yahE,yahF,yahG,yahH,yahI,yahJ,yahK,yahL,yahM,yahN,yahO,prpR,prpB,prpC,prpD,prpE,codB,codA,cynR,cynT,cynS,cynX,lacA,lacY,lacZ,lacI,mhpR,mhpA,mhpB,mhpC,mhpD,mhpF,mhpE,mhpT,yaiL |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 332365 | 0 (0.000) | 128 (1.310) | 72/98 | 0.0 | 100% | intergenic (+489/‑6) | yahV/pdeL | protein YahV/DNA‑binding transcriptional activator/c‑di‑GMP phosphodiesterase PdeL |
| ? | NC_000913 | 377317 = | NA (NA) | intergenic (+6/+218) | yaiL/frmB | DUF2058 domain‑containing protein YaiL/S‑formylglutathione hydrolase FrmB | |||||
Only 100 of 128 total aligned reads displayed.
GAATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/332317‑332365‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAG > NC_000913/377317‑377365 GAATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGG < 1:2505393/50‑1 AATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGA > 1:5984579/1‑50 AATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGA > 1:5737070/1‑50 AATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGA > 1:4370524/1‑50 ATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGA > 1:2892517/1‑49 TCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATA < 1:6819106/50‑1 TCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATA < 1:1208499/50‑1 TCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGAT > 1:3968843/1‑49 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAG < 1:2383085/50‑1 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAG < 1:4329168/50‑1 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAA < 1:1286937/49‑1 GACAGGTAATCACTCATACCGAACAGCGATAAAAGATAAAGGTGGATAAG > 1:4546095/1‑50 ACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGT < 1:3072345/50‑1 ACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGT > 1:6360471/1‑50 ACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGT < 1:6695397/50‑1 CAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGgc < 1:1684265/50‑3 CAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTC > 1:4674281/1‑50 CAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTC < 1:3832652/50‑1 CAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTC > 1:1480042/1‑50 AGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCG > 1:3114977/1‑50 GGTAATCACTCATTCTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGT < 1:4626108/50‑1 GGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGT < 1:4792378/50‑1 GGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGT < 1:1133537/50‑1 GGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGT > 1:1883604/1‑50 GGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGT < 1:2352959/50‑1 TAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGC < 1:4723848/50‑1 AATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCG > 1:4276232/1‑50 ATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCG < 1:3324896/49‑1 TCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCG > 1:6654311/1‑48 ACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAG < 1:868455/49‑1 ACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCG > 1:6464589/1‑46 ACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCG > 1:1807229/1‑46 CTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGAT > 1:4855651/1‑50 TCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATG > 1:510112/1‑50 CATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGC > 1:1013816/1‑50 ATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCC > 1:902513/1‑50 ATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCC < 1:6770160/50‑1 ATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGC < 1:4906165/49‑1 TACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCT < 1:5867244/50‑1 CTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGA > 1:4810664/1‑50 CTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGA > 1:3386439/1‑50 CTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGA > 1:3025172/1‑50 TGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT > 1:646618/1‑50 TGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT > 1:3456547/1‑50 GAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATG > 1:4177993/1‑50 GAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATG > 1:6290827/1‑50 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGC > 1:6970627/1‑50 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGC < 1:5752387/50‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGC < 1:6823254/50‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATG < 1:2031119/49‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT < 1:3105588/48‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT < 1:3326184/48‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT < 1:7100940/48‑1 ACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCG < 1:6679991/50‑1 ACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGC > 1:3980640/1‑49 CAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGA < 1:516713/50‑1 AGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGAC > 1:3625984/1‑50 AGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGAC < 1:7060636/50‑1 AGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGAC < 1:4259999/50‑1 AGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGAC < 1:6183935/50‑1 AGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGAC < 1:6472030/50‑1 GCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACG > 1:3831234/1‑50 GCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACG < 1:2767897/50‑1 CGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGC > 1:7224085/1‑50 CGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGC < 1:6219167/50‑1 CGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGC > 1:3331400/1‑50 CGATAAAAGACAAAGGTGGATAAGTCGTGCGCAGACGCCTGATGCGACGC > 1:7327533/1‑50 GATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCT < 1:638403/50‑1 GATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGC > 1:6195064/1‑49 GATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGC > 1:4551253/1‑49 ATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTA > 1:540968/1‑50 TAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTAT < 1:5640307/50‑1 TAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTAT < 1:7028796/50‑1 AAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATG > 1:7353537/1‑50 AAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATG > 1:4343379/1‑50 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGC < 1:1562557/50‑1 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGC > 1:6094321/1‑50 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGC < 1:6998700/50‑1 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATG < 1:1507566/49‑1 AAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCG > 1:5626471/1‑50 AAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCG > 1:4252439/1‑50 AAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCG < 1:2378828/50‑1 AGATGAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGC < 1:3040658/50‑1 AGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGC < 1:6559395/50‑1 AGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGC > 1:4643915/1‑50 AGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGC > 1:2379119/1‑50 GATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCG > 1:6971362/1‑50 TAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTC < 1:2138004/50‑1 TAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTC < 1:2538641/50‑1 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTT < 1:3228602/50‑1 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCT < 1:6431790/49‑1 AGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTA > 1:7480315/1‑50 GGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAT < 1:6461101/50‑1 GTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATC < 1:1489528/50‑1 GTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATC < 1:3036153/50‑1 GTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAT > 1:7114037/1‑49 TGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCA < 1:3561840/50‑1 TGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCA < 1:7400593/50‑1 TGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAT > 1:4398827/1‑48 TGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAT > 1:1742360/1‑48 GAATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/332317‑332365‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAG > NC_000913/377317‑377365 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |