| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2066304 | NA (NA) | 94 (0.960) | 60/98 | 0.0 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
| ? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor | |||||
CAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2066256‑2066304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCG > NC_000913/2080592‑2080638 CAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:7270072/1‑50 AGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGC < 1:6888755/50‑1 AGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGC < 1:1926444/50‑1 AGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGC < 1:2199048/50‑1 AGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:5268670/1‑49 GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCA < 1:2665889/50‑1 GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCA < 1:3239679/50‑1 GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:6913174/1‑48 GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:1255038/1‑48 GCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:6468785/1‑48 CCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAG < 1:7428299/50‑1 CCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAG < 1:3902385/50‑1 CCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:6332976/1‑47 CCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTG > 1:5731402/1‑47 CTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA < 1:6266160/50‑1 CTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA < 1:2262051/50‑1 TATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGA > 1:6674551/1‑49 ATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAA > 1:4245265/1‑50 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAAC < 1:6601918/50‑1 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAAC < 1:3404403/50‑1 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAAC > 1:1061553/1‑50 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAA < 1:4076987/49‑1 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAA < 1:3840928/49‑1 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAA < 1:884136/48‑1 TTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAA < 1:4210130/48‑1 TTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACT > 1:1233378/1‑50 TAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTC > 1:6342797/1‑50 TAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACT < 1:1042657/49‑1 AGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC > 1:480319/1‑50 AGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC > 1:5770004/1‑50 AGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC > 1:2356712/1‑50 AGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTC < 1:2664969/49‑1 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC < 1:5858776/49‑1 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC < 1:5278223/49‑1 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC < 1:5377086/49‑1 GACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCC < 1:584927/49‑1 ACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG > 1:109904/1‑49 ACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG > 1:4629488/1‑49 ACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCG > 1:5290965/1‑49 CCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGT > 1:6279899/1‑49 CGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAA > 1:1493239/1‑50 GTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:3278883/1‑50 GTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:7207235/1‑50 GTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:2357052/1‑50 GTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:161162/1‑50 TTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATG < 1:2077121/50‑1 TTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATG < 1:6872824/50‑1 TTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAAT > 1:7193302/1‑49 CTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAG < 1:1322137/49‑1 CTTCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAG < 1:3707919/49‑1 TCGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGAT > 1:4690793/1‑49 CGCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGA < 1:3575887/47‑1 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA < 1:3945445/50‑1 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA < 1:6097061/50‑1 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTA > 1:5104696/1‑49 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTA > 1:5159683/1‑49 GCCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTA < 1:2403937/49‑1 CCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA > 1:6978931/1‑49 CCATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAA > 1:1107100/1‑49 CATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAA < 1:7056457/50‑1 CATTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAA < 1:2558600/50‑1 TTTAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGC > 1:3660624/1‑50 TAAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCG < 1:2206887/49‑1 AAGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT > 1:3101854/1‑50 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTC < 1:3542924/50‑1 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTC < 1:3528674/50‑1 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT < 1:1313855/49‑1 AGGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCT > 1:6778065/1‑49 GGCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCA > 1:2552164/1‑50 GCGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT < 1:2822419/50‑1 CGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATA < 1:6113290/50‑1 CGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT > 1:4955246/1‑49 CGTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAT > 1:5488708/1‑49 GTTATCCCCAGTTTGCAGAAACTTCGTAATGAGATTAAAAGCGCTCATAA > 1:3354108/1‑50 GTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAA > 1:4148494/1‑50 GTTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAA < 1:2715279/50‑1 TTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAC < 1:2287203/50‑1 TTATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAC > 1:7306979/1‑50 ATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACT < 1:1579813/49‑1 ATCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACT > 1:1427422/1‑49 TCCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTC < 1:1438004/49‑1 CCCCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCAT > 1:4014673/1‑50 CCAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCT < 1:2257131/50‑1 CAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTG > 1:3253519/1‑50 CAGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTG < 1:4620400/50‑1 AGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGT > 1:2546691/1‑50 AGTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGT < 1:5424240/50‑1 GTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC > 1:3216975/1‑50 GTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC < 1:6234947/50‑1 GTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC < 1:5616014/50‑1 GTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC < 1:4874791/50‑1 GTTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTC < 1:2462446/50‑1 TTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCG < 1:6806704/50‑1 TTTGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCG < 1:5014070/50‑1 CAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2066256‑2066304‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCG > NC_000913/2080592‑2080638 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |