| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,509,631 | Δ8,319 bp | [yfeO]–pdeA | [yfeO], ypeC, mntH, nupC, insL‑3, pdeA | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2509631 | 2517949 | 8319 | 85 [0] | [0] 84 | [yfeO]–pdeA | [yfeO],ypeC,mntH,nupC,insL‑3,pdeA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2509630 | 0 (0.000) | 83 (0.850) | 55/98 | 0.0 | 100% | coding (1/1257 nt) | yfeO | putative transport protein YfeO |
| ? | NC_000913 | 2517950 = | 0 (0.000) | intergenic (‑118/+91) | pdeA/alaX | putative c‑di‑GMP phosphodiesterase PdeA/tRNA‑Ala | |||||
TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2509583‑2509630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > NC_000913/2517950‑2517998 TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAC < 1:4397676/49‑1TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAC < 1:6599117/49‑1 GCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACA < 1:6413557/49‑1 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAG < 1:1150062/49‑1 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAG < 1:6629730/49‑1 AAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGC > 1:4607024/1‑50 AAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGC < 1:2331532/50‑1 AAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGC < 1:7333167/50‑1 AGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCG < 1:4128928/50‑1 CTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGC < 1:2869713/50‑1 TGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCA > 1:3246360/1‑50 TGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCA > 1:5089287/1‑50 TGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCA > 1:2511968/1‑50 GGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCAC < 1:1407964/49‑1 GCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTA < 1:6917146/50‑1 GCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACT > 1:2939111/1‑49 GCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACT > 1:6171517/1‑49 CAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAA < 1:4514356/50‑1 AACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACC > 1:6404600/1‑50 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCC < 1:4523096/50‑1 CTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCG < 1:2491938/50‑1 CTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCG < 1:5858525/50‑1 CTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCG > 1:1940051/1‑50 TAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCG > 1:1278383/1‑49 AAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGA > 1:669910/1‑50 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGAC < 1:3607203/50‑1 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGAC > 1:3676959/1‑50 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGAC < 1:4963110/50‑1 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGAC < 1:6971914/50‑1 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGAC < 1:860157/50‑1 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGAC < 1:2228337/50‑1 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGAC < 1:1460927/50‑1 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGAC < 1:6130592/50‑1 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGA < 1:5257433/49‑1 TATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGT < 1:153942/50‑1 ATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 1:6205744/1‑48 ATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 1:4480299/1‑48 TCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 1:2011669/1‑47 CTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGA > 1:4113727/1‑50 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTG < 1:3239856/50‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTG > 1:171068/1‑50 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACT < 1:5660192/49‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACT < 1:6009437/49‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAG < 1:7004532/46‑1 CCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTG > 1:2038322/1‑49 CCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTG > 1:4577873/1‑49 CCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTA > 1:6706473/1‑50 CCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTAT > 1:3455007/1‑50 CCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTAT > 1:1088922/1‑50 CCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTAT < 1:7422593/50‑1 CGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATT < 1:2690097/50‑1 GCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA < 1:1020865/50‑1 GCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA < 1:5672461/50‑1 CATAAGGAATAGAACACAGGCGGCGCTAACCCGGACGTAGACTGTATTAC < 1:2414442/50‑1 CATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTAC < 1:2874089/50‑1 CATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTA > 1:4377296/1‑49 ATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACA < 1:2368248/50‑1 ATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTAC > 1:4998546/1‑49 ATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTAC > 1:6324604/1‑49 TAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACA > 1:1432087/1‑49 AAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAA > 1:3093460/1‑49 AAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAA > 1:3018453/1‑49 AAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAA > 1:6211855/1‑49 AGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAA < 1:374314/50‑1 AGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAA < 1:5897322/50‑1 AGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAA < 1:7031841/49‑1 AGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAA > 1:2577876/1‑48 GGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAG < 1:1238120/50‑1 GGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAG > 1:2780217/1‑50 ATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGG > 1:102354/1‑50 ATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGG > 1:5315763/1‑50 ATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGG < 1:2920511/50‑1 TAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGG > 1:6141778/1‑49 TAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGG > 1:2607250/1‑49 GAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAA < 1:1481769/50‑1 GAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCA > 1:1842169/1‑49 GAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCA < 1:1621952/49‑1 ACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAA < 1:5434870/50‑1 ACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAA < 1:4778045/50‑1 CACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAA < 1:5111226/50‑1 CACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAA < 1:7007225/50‑1 CACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAA < 1:928627/50‑1 ACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG < 1:563794/50‑1 TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2509583‑2509630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > NC_000913/2517950‑2517998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |